Zingiber officinale (ginger): 122021300
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Entry
122021300 CDS
T08725
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122021300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122021300
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
122021300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
HEAT
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
HEAT_2
Beta-prop_EML
WDR90_beta-prop_4th
PEP5_VPS11_N
Peptidase_C14
Beta-prop_EIPR1
HEAT_EZ
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
122021300
NCBI-ProteinID:
XP_042435340
LinkDB
All DBs
Position
1A:complement(24933962..24951686)
Genome browser
AA seq
1362 aa
AA seq
DB search
MALGDLMSSRLSGSSPSVSHHLDEFSGREDGEDEVGERELEAAQPSGSNLQVTAAAAEGN
SMVYLTQTVVLSEFLHEGFEDCTEVGPSDNGLVSKWRPKDRLKTGCVALVLCLNIGVNPP
DVIKISPCAQMECWIDPHSMAAPKALETIGKALHAQYECWQRRQQVRYKLQLDPTVEEVK
KLCNTCRKYAKSERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPINELDSWLKTPSI
YVFDCSAAGMIVKAFLERQDWNTSAASGSSSKDFIMLAACEAHETLPQSVEFPADVFTSC
LTTPIKMALRWFSSRSLLRDSLNYSLIDQIPGLQNERKTLLGELNWIFTAVTDTIAWNVL
PRDLFQRLFRQDLLVASLFRNFLLAERIMRAANCSPISYPLLPPTHQHHMWDAWDMAAEI
CLSKLPQLIDNPNADFQPSPFFTEQLTAFEVWLAHGSKHKKPPEQLPIVLQVLLSQSHRF
RALVLLGKFLDMGPWAVDLALSVGIFPYVLKLLQTTATELRQILVFIWTKILALDKSCQV
DLVKDGGHTYFIRFLDSMDAYAEQRAMAAFVLAVVVDGHRRGQEACIQANLINVCLKHLQ
IANPSDGQTEPLLLQWLCLCLGKLWEDFPEAQIIGSHADGPATILPLLLEPQPEVRASAV
FALGTLIDVASVTFDDGHRVDEDFEDDEKLKSELNIIKNLLQLAVDGSPLVRAEVAVALA
RFAFAYNKPLKLTAAENWKHLSSLPSLASINHPNSLSPSQFMQSGRTIAHSGLVLRGNRE
NNTAGREGRISRSSPISSVGIMHGSPLSDDSSHHSDSGILAKEIGSNGVLNCSRARPLDN
ALCSQFTMALCNMAKDPSPRVASLAQRSLSIIGVELVVTKAPRLGVHPGDSSVPSRTSNL
PGLARSSSWFDLNAVNAGQISVAFRTPPVSPPRQNYMAGLRRVCSLEFRPHQLNSPDTGL
ADPLLGAAGLSGGSERSLLPHSTIYNWSCGHFSRPLLAGADDNEETISRREERERIALDC
MVKCQHSSNVKLANQIASWDTKFETGTKVSLLLPFSPIVVAADENEHIRVWNYEEATSLN
NFNNHESSDRGISKLSLVNEFDDSLLLVASSDGNVRFWKNFTVRGKQKLVTAFSSVLGHR
SAARGTFAVVDWQQQSGYLYASSDTSPVLLWDLDKEQLVNSIPSSSDNCISALSASQVHS
GQFAAGFVDGTIRIYDIRTPEMPVCTAQPHTQKVEKVVGIGFQPGFDPTKIVSASLAGDI
QFLDFRNQSEPYLTFDAHRGSLTALAIHRHAPIIASGSAKQLVKVFSLNGEPLGMIRNYP
TFMAQRIGSVSCLTFHPYKVLLAIGAGDACVSIYADDSYQTR
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggagatctgatgtcgtccaggttgtccgggtcgtcgccgtccgtttcgcat
catttggatgagttctctggccgggaggatggggaagacgaagtgggagagagggagctg
gaggcggcgcagccatctgggagcaacttgcaggtgacggctgctgctgccgaaggcaat
agcatggtgtacttgactcagacagtcgttctctcggaatttctgcatgaaggtttcgag
gattgcacggaggtagggccttcagacaacgggttggtgtcgaagtggcggcccaaggac
cggcttaaaacgggttgtgtagcactcgtgttatgtttaaatattggtgtgaacccgcct
gatgttataaaaatatctccttgtgcccagatggagtgttggatagatcctcattctatg
gctgctccaaaagctcttgaaacaattggaaaggcattgcatgctcagtatgaatgttgg
cagcgtcggcaacaggttcgttataagcttcaacttgatcccacagtggaggaagtgaag
aagctttgtaatacttgccggaaatatgctaagtcagaaagggttctctttcattataat
gggcatggagtgcctaagcctacagcaaatggagaaatttgggtcttcaacaagagttac
acacaatatattccattacctatcaatgagctcgactcatggcttaagacaccttcaatc
tatgtgtttgactgctctgcagcagggatgattgtcaaagcctttctagagcgccaagat
tggaatacctctgctgcatctggttcctcatcaaaggattttattatgcttgctgcttgt
gaagcacatgagactcttcctcaaagtgttgaatttcctgctgatgtgttcacatcctgc
ctcactacacctataaaaatggcattgcgttggttttcctctcgatctttacttcgtgat
tctctcaactactctcttatcgatcaaattcctgggcttcagaatgaacgaaagacgctt
ctaggggagctgaattggatttttactgctgttaccgacacaattgcatggaatgtcctt
cctcgtgatcttttccagagactgtttaggcaagacctgttagttgcaagtctctttcgc
aatttcttacttgctgagcgaattatgagagctgctaactgctctcctatttcatatcca
ttgttgccaccaactcatcagcatcatatgtgggatgcatgggatatggctgctgaaatt
tgcttgtctaaacttccacagttgattgataatccaaatgctgacttccagccaagccca
ttctttacagagcaactgacagcttttgaggtgtggctggcccatggctccaaacacaag
aaaccaccagaacagcttccaatagttcttcaggttctactgagccagtctcatcgattc
cgtgcattggtcctcttaggaaaattccttgatatgggaccttgggctgtggatctggcg
ttgtctgttggcatctttccttatgtcttaaagcttttacaaaccactgctactgaattg
cgacaaatactggtcttcatttggaccaaaattcttgctcttgacaagtcttgtcaggta
gatctggtgaaagatggtggtcacacatattttatcaggtttcttgatagcatggatgcc
tatgctgagcagcgagcaatggctgcttttgtcttggcagttgtagtggatggacatcgg
cggggacaagaagcatgtattcaagcaaatttgataaatgtgtgcctgaagcatttacaa
attgctaatccaagtgatgggcaaactgaacctttacttctccaatggctttgtttatgt
ctgggaaagctctgggaagattttccggaagcacaaatcataggttctcatgcagatgga
ccagcaactattttacctttattgctggagccacagcctgaggttagagcttctgctgtt
tttgctttggggactcttattgatgttgcatctgtcacatttgatgatgggcatagagtt
gatgaggactttgaggatgatgaaaagttaaagtccgagttgaatatcattaaaaatctt
ctacaacttgctgtggatggaagtcctttggtgagggctgaggttgctgtagctcttgca
cgctttgcctttgcttacaacaaacctcttaagttaactgctgctgaaaattggaagcat
ctgagctctttgccatctctggccagcataaatcatcctaacagcttatcacccagtcaa
tttatgcagtcaggaaggaccatcgcacatagtggtcttgtattaagaggtaaccgtgag
aataatacagctggtagagaaggaaggatatccagaagtagtcctatttcatcggttggc
ataatgcatggctctccactgtctgatgattcttctcatcattctgattctgggatactg
gccaaagaaattggtagtaatggggtccttaattgctctagagcaagacctttggataat
gctttatgttctcagtttactatggctttgtgtaacatggcaaaggatccttctcctcgt
gttgcaagccttgcccaaagatcactctccataattggtgttgaactagtggttactaaa
gctccaaggttaggcgtacacccgggagattcttctgttccatctcgcacttctaatctt
cctggattggcacgttcatcctcatggtttgacttgaatgctgttaatgcaggtcagata
tctgtggcattccgaacccctccggtcagccctcctcgtcaaaattatatggcaggactg
cgccgagtatgctctctggagttcaggccacatcaactaaattctccagatactggatta
gctgatccacttctaggagctgctggattgtctggtggttctgaacgtagcttacttcca
cattcaactatttataactggagttgtggtcatttttctagaccgcttcttgctggagct
gatgacaatgaagaaactatttctagaagagaagaaagagagagaattgctttagattgc
atggttaagtgccaacattcttctaatgtaaaacttgccaatcaaattgctagctgggac
accaagtttgaaacaggcacgaaggtttcattgctcttgccattttctccaattgtagtt
gctgctgatgagaatgaacatatcagggtatggaattatgaagaagctacttctttgaac
aattttaataatcatgaatcatctgatagagggatatccaagctctccctagtgaatgaa
tttgatgacagcttgcttctagttgcttcaagtgatggaaatgttcgtttttggaaaaat
ttcacagtaaggggaaaacagaaacttgtaacagcattttcttcagtcctaggtcatcgg
agtgcagctcgtggtacatttgcagttgttgactggcagcaacagtctggctatttgtat
gcttctagtgacacatcacctgtcctgctttgggatctggacaaagaacagctagttaac
tccatcccatcatcctctgacaactgcatatcagcattgtctgcttctcaagttcacagt
ggtcaatttgcagctggctttgttgatggcactatcaggatatatgatatccgcactcct
gaaatgccggtctgcactgctcaacctcatacacagaaggtggagaaggttgtgggaatt
gggtttcagcctggatttgatccaactaagattgtcagtgcatcgcttgcaggagatata
cagttcttggatttcagaaaccaatccgaaccatatcttaccttcgatgcacataggggc
tctcttactgccttggcaattcatcgacatgccccaattattgcgagtggttcggctaag
caacttgtgaaggttttcagcctaaatggagaaccgctaggcatgatcagaaattacccc
actttcatggctcagagaataggttctgttagttgtcttactttccacccgtacaaagta
ctccttgctattggtgcaggggatgcctgtgtatctatttatgcagacgacagttaccaa
acaagataa
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integrated database retrieval system
