Zingiber officinale (ginger): 122021317
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Entry
122021317 CDS
T08725
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122021317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122021317
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
122021317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
122021317
NCBI-ProteinID:
XP_042435367
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All DBs
Position
9A:complement(18411775..18415419)
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AA seq
308 aa
AA seq
DB search
MRPPRGGGSFRGRSDGGGGRGRGRGTGGRGGGGEGRGGGRGRGGGRGGRGGRGRGGGRGG
GMKGGSKVVVQPHRHDGVFVAKGKEDALCTKNMVPGESVYGEKRVSVQNEDGTKVEYRIW
NPFRSKLAAAILGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSG
RDLVNMAKKHTNVIPIIEDARHPARYRMLVGMVDVVFSDVAQPDQARILALNASYFLKNG
GHFVISIKANCIDSTVPAEAVFAQEVKKLQAEQFKPSEQVTLEPFERDHACVVGSYRMPK
KQKLATES
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagacctccaagaggcggtggtagcttcaggggccggagcgatggaggtggagggaga
ggcagggggagaggtacgggaggtcgaggcggtggtggtgaaggccgtgggggtggaagg
ggccgtggcggcggacgaggaggtaggggaggaagaggacgcgggggaggccgcggtggg
gggatgaagggcgggagtaaggtcgttgtccagccacacaggcacgacggagttttcgtg
gctaaagggaaggaagacgcactctgcacgaagaacatggtacctggtgaatctgtttat
ggagagaagcgagtttctgttcagaatgaagatgggactaaagttgagtacaggatatgg
aatcctttccgatcaaaacttgcagctgctattcttggtggcgtggacaacatttggatt
gctcctggaactcgtgtactttatcttggtgctgcatcagggaccacggtgtctcatgtt
tctgacattgttggacctacaggagttgtgtatgcggtggaattttcacatagaagtggt
agagatcttgtaaacatggcgaaaaagcataccaatgtaattcccataatagaggatgct
agacatccggctagatataggatgttagttggcatggttgatgttgtcttttcagatgtg
gctcagcctgatcaggcacgtatcttagctctgaatgcttcttatttcttgaagaacggt
ggacattttgtaatttcaattaaggccaactgcatcgactccacggttcctgctgaggct
gtttttgcccaagaagtgaagaaattgcaggctgaacaattcaaaccgtctgagcaagtc
acattggaaccatttgaaagagatcatgcctgtgttgtcggcagctaccgcatgccaaag
aaacagaaactagccactgaaagctga
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