Zingiber officinale (ginger): 122021319
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Entry
122021319 CDS
T08725
Name
(RefSeq) anaphase-promoting complex subunit 6-like isoform X1
KO
K03353
anaphase-promoting complex subunit 6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122021319
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122021319
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122021319
03036 Chromosome and associated proteins [BR:
zof03036
]
122021319
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122021319
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
122021319
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122021319
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
ANAPC3
TPR_8
TPR_12
TPR_14
TPR_16
TPR_7
TPR_11
TPR_19
TPR_17
CFAP70_TPR_C
ARM_TT21_4th
TPR_CcmH_CycH
RMD1-3
CABIN1_N
TPR_10
TPR_3
TTC22_N
TPR_9
TPR_15
TPR_Slam
YPL108W_C
TPR_Psidin_N
TPR_YpiA
Motif
Other DBs
NCBI-GeneID:
122021319
NCBI-ProteinID:
XP_042435369
LinkDB
All DBs
Position
9A:28518039..28554267
Genome browser
AA seq
541 aa
AA seq
DB search
MREEEVERMRGVVRDCVSKHLYSSAIFFSDMVAAATGDPADIYMQAQALFLGRQYRRALH
LLNSSQIVLRDLRFRYLAAKCLEELKEWHQCLAMLGDAKVDEHGHVLSQKDGTAMYLDKD
GEDHEINIISAICFLRGKAYEALENRAQARQWYKAAVKADPLCFEALECLVDNYMLTCEE
ESNLLASLQFGKDDRWLSSFYSCLVKKHDKEHVVEAKFTELEREICGVASSTSSFSQKLK
NNTDLLSRRAEYYYNNGEYQKCFELTSVVLERDPYHFKCTLVHLAAAMELGRSNDLYLMS
CNLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFCKATTLDGAFPPAWIGIGNAYAAQSE
GEQAMAAFRTGARLFPGCHLPTLYIGMEYMQTHNYKLAEQFFLQAKRICPSDPLVYNELG
VVAYHMREYQKAVQWFEMTLDCVPSSLSEMWEPTLVNLAHALRKLKRFYKAISCYEKALA
LSTRNFDTFAGLAYTFHLQDNYDAAITYYHKALWLDPNDQFCTEMLALALEDDIRNTDHR
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggaggaggtggagaggatgcgaggagtggtgcgtgactgcgtcagcaagcat
ctctactcgtcagccatcttcttctctgatatggtggcggcggcaaccggtgatcctgcc
gacatctacatgcaggcccaggctctcttcttaggtcgccagtaccgccgtgccctccac
cttcttaattcttcccagatcgtcctacgcgaccttcggtttcgctacctcgctgccaaa
tgtttggaagagctgaaagaatggcatcaatgtcttgctatgcttggtgatgctaaagtt
gatgaacatggacatgttctttcacaaaaggatgggacggcaatgtacttggataaagat
ggagaagatcatgaaattaatattatctctgcaatttgttttttacgtggcaaggcatat
gaggctttggaaaatcgcgctcaagccagacaatggtataaagcagctgttaaggcagat
ccgttatgttttgaggctttggaatgtctggttgacaattacatgctcacatgtgaggag
gaatcaaatctattagcttctttgcaatttgggaaagatgataggtggctttcctcattc
tactcatgtcttgtaaagaagcatgacaaagaacatgttgtagaagccaagttcacagag
cttgaaagagagatttgtggtgttgcatcttctacttcttcttttagccaaaaactaaaa
aacaacactgatttactctcccgcagagctgaatactattacaacaatggagagtatcaa
aaatgctttgagctcacatctgtggtattagaaagagatccttaccattttaaatgtaca
ttagttcatttagcggctgcaatggagcttggtcgctcaaatgatctctatctgatgtcc
tgcaatttggtgaaagattatcctcaaaaagctctgtcctggtttgctgttggatgttac
tactattgtatcaagaaatatgaccagtcacggagatacttttgcaaggctaccaccttg
gatggggcatttccacctgcttggataggtattggtaatgcttatgctgcacaaagtgag
ggtgaacaagcaatggctgcattccgcacaggagctcgtttgtttcctgggtgtcacttg
ccaaccctctatattggaatggaatacatgcaaacacataattacaagcttgcagaacaa
ttctttttgcaggcaaaaaggatatgcccttctgatccacttgtatacaatgaacttgga
gttgtcgcttatcatatgagggagtatcagaaagcagttcaatggtttgagatgactctg
gattgtgtgccatcgtcattgagtgagatgtgggaaccaactttggtaaacctcgcacat
gcattaagaaaactaaagaggttctacaaggctatctcttgttatgaaaaggctcttgct
ctttctactcgcaattttgacacatttgctggtctggcatatacttttcatctgcaggac
aattatgatgccgcaataacctactaccacaaagctctctggcttgatccaaacgatcag
ttctgtacagaaatgctggctcttgctcttgaggatgacatcagaaatacagatcatcgt
aaataa
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