Zingiber officinale (ginger): 122021384
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Entry
122021384 CDS
T08725
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122021384
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122021384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
122021384
NCBI-ProteinID:
XP_042435442
LinkDB
All DBs
Position
9A:103336125..103360056
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AA seq
439 aa
AA seq
DB search
MGWCSNCEECPIYRDPENGYVCCTLCGRILDQEIYCSRLTFAKDTGGQVYHSTSNIIKIL
QHESSASNLRTLKKGRDEISYIVNVLNISGGDTIINNACAFYEMVVDTNFTKGCKISHVA
ATCLYLACRQSKKDYLLIDFSDYLKINVYVLGAMFLQLCKTLNLLEHLIVLKIVDPSFFI
HRFTKRLLGKKNDAVSELALRLVASMKRDWMQTGKKPNGLCGAALYISVHSHGLNYSKSD
IVSAVHICEATLNRRLIEFENNESNQLSSYIDIGRGWVPRCVRSQLLQNEGSCDGNMTPY
VGHVEGKASKESKEPCSADSAGHELIDPSTFSEQHGFADSEDDGSDYLSFSDIDDAGSKQ
DNAKRQKVESDVGDPHKTPEKKDDHSDDPDDKDSDGSGSSENDNEDRDYGDDEDYDYGDE
DYDYDYDYEGEDYGYKDDF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtgtagtaattgcgaggaatgccccatctatagggatcctgagaacggttat
gtgtgctgtaccttatgtggaaggattctcgatcaagagatttactgcagtcgtctcact
tttgcaaaggataccggtggccaggtttatcatagtactagtaatatcataaagattttg
caacatgaatcctctgcatcaaatttaagaactctaaagaaaggaagagatgagattagc
tatattgtaaatgtcttgaacattagcggtggagatactataatcaacaatgcttgtgct
ttctatgagatggttgtagatacaaatttcaccaaaggatgcaagatatctcatgttgct
gcaacttgtctctatcttgcatgcaggcaaagcaaaaaggactatcttctcattgatttc
tctgactacttgaagataaatgtgtatgtgcttggagctatgtttttgcaactttgtaaa
actttgaacctcttggaacacctaattgtcctaaaaatagtggatccaagtttttttatc
catcgatttacaaagcgactattaggcaaaaagaatgatgcagtttctgaattggctctt
cgcttggttgcaagcatgaagagagattggatgcagacagggaagaaacccaacggatta
tgcggtgcagcattatacatatctgtacattctcatggacttaattactccaaatcagat
attgtttctgctgtacacatttgtgaagcgactctgaatagacgactaatagagtttgaa
aataatgagtctaatcagcttagctcctacattgacattggaagaggctgggtacctaga
tgtgtgcgcagccagctgttacagaatgagggaagctgtgatggtaatatgactccatat
gttggccatgttgaaggaaaagcatcaaaggaatcaaaggaaccttgtagtgctgattct
gcagggcatgagttgattgacccatcaactttcagtgaacaacatggttttgcagactca
gaagatgatgggagtgactatttgtctttttctgacattgatgatgctgggtctaaacaa
gacaatgcgaagaggcaaaaggttgaatcagatgttggtgatcctcataaaactcccgaa
aagaaggatgatcattcagatgatccagatgacaaggatagtgatgggtcaggatcatct
gagaatgataatgaagatagagactatggagatgatgaagactatgactatggagacgaa
gactatgactatgactatgactatgaaggtgaagattatggttacaaggatgatttttga
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