Zingiber officinale (ginger): 122021479
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Entry
122021479 CDS
T08725
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122021479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122021479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122021479
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122021479
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122021479
Exosomal proteins of other body fluids (saliva and urine)
122021479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DAM-like-phage2
Fusion_gly
ETRAMP
T2SSF
DUF6548
DUF2116
DUF6584
DUF2383
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
122021479
NCBI-ProteinID:
XP_042435535
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Position
9A:21816050..21819091
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AA seq
303 aa
AA seq
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MNNLLTESFGRVSGCYPGEGDIESRGVSPEAKDMEGFFKHVGEIEQETEKINEYFLKLQS
TNKESQLVTKASDMKGIKKQMEKDVDEVKKITLKIKAMLEQLDRENLSNRQKPGCEKGTA
IDRSRIGMTVALKKKLKERMTQFQTLRQTIQDEHREVVERRVFTVTGERPDEETVEQLIE
TGRSEQIFEKAIHNCGRGQVVDTLAEIQERRDTMLELEQKLINLQQMFLDMAVLVDAQGD
LLNNIETQVTKSVSHVEKARETLQEAKKLQKNTRKYMCIAIIILIIVILIAIGGVMTGAS
KSA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcttctgacggaatcatttggaagggtaagcggttgttaccccggcgaggga
gacatcgaatcaagaggggtttcacccgaagccaaggacatggaagggttcttcaaacat
gttggggaaatagagcaagagactgagaaaataaatgaatacttcctcaagctacagtct
acaaacaaggagtcccagcttgtaacaaaggcatcagacatgaaaggcatcaaaaaacag
atggagaaggatgtggatgaagttaagaaaatcactttgaagatcaaagcaatgctagag
caactcgacagagaaaacttaagcaataggcagaaaccggggtgcgaaaaagggaccgct
atcgatcggtctaggataggaatgactgtggctcttaaaaagaagctgaaagagagaatg
acacagtttcagactttgagacaaaccatccaagatgagcaccgggaggtagtcgaaaga
agagtattcacagtgacaggggaaaggcctgatgaggaaacggtcgaacaattgatcgaa
acgggaagaagtgaacagatattcgagaaggcaatccacaattgcggccgcggacaagta
gtggatacactggcagagatacaagagaggcgcgacaccatgctcgagttagagcaaaag
cttatcaatctacaacaaatgttcttggacatggcagtgttggtagatgcccagggagat
ctactcaataacattgagacacaggtcaccaaatcagtgtctcatgtggagaaggcgagg
gaaactctacaagaagccaagaagctacagaagaacacaaggaagtacatgtgcattgcc
atcatcatcctgattattgttattttaattgcaattgggggagtaatgacgggagcaagt
aaatctgcttaa
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integrated database retrieval system