Zingiber officinale (ginger): 122021528
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Entry
122021528 CDS
T08725
Name
(RefSeq) protein SHORT-ROOT 1-like
KO
K27743
protein SHORT-ROOT
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122021528
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
GRAS
122021528
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
122021528
NCBI-ProteinID:
XP_042435584
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All DBs
Position
9A:complement(28309926..28311947)
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AA seq
524 aa
AA seq
DB search
MDTLFRLFSPQSNSHRQSSYDLSRNSSSSRSSGDPSLHQINGGYYLEQPDYSFPHQDPYS
HRDQECGTNHHGLFMDEDFSSSSSSKHLGGHRPPATPTLVFDPAAAAADLNLDVFSSPIS
SSSASGSGGGGRWASQLLLECARAVAARDTQRAQQLTWMLNELASPYGDAEQKVAAYFLQ
GLFARLTASGQRTLRTLAAASDRNCSFDSARRTALRFQELSPWSSFGHVAANGAILEAFL
EGTPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSSMQRVMKEIGQR
MEKFARLMGVPFRFNVVHHAGDLSSLDLDTLDLRCDDSVSGLAVNCVNALHAISPSGGRR
GGFLAAIRRLRPRIVTVVEEEADLAGVDGGDEPEEGEAFMKVFQESLRFFTAYMESLEES
FPRTSNERLSLERTAGRAVVDIVSCAPSESAERREKAAVWSRRMRTAGFAPSAFSEDAAD
DVRALLRRYREGWSMRSSTTDADDAGVFLEWKEQAVVWASAWKP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgtttagattatttagtcctcaatccaattcgcatcggcaatcttcctac
gatctgagtcggaattcgagcagctctagatcctccggcgacccctctctgcaccagatc
aacggcggctactacttggagcagcccgattattcgttccctcatcaggatccgtactcg
catcgagatcaagaatgcggcaccaaccaccacggccttttcatggatgaagacttctcc
tcctcctcctcctccaagcacttgggtggtcaccgtccgccggccacgccgaccctggtg
ttcgaccccgccgccgcagctgctgacctcaacctcgacgtcttctcctcgcccatctcc
tcgtcctccgcctcggggtctggcggtggggggaggtgggcgtcgcagctgcttctcgag
tgtgcgcgcgccgtggctgcgcgcgacacccagcgagcgcagcagctgacgtggatgctc
aacgagctggcgtcgccctacggcgacgccgagcagaaggttgccgcctacttcctgcag
ggtctcttcgctcggctgacggcgtccgggcagcgaacgctgcgcaccctcgctgccgcc
tccgaccgcaactgttccttcgactccgcccgccggactgcgctgcgtttccaggaactc
agcccctggtcctccttcggccacgtggctgccaacggagccattctcgaagccttcctc
gaggggacgccgcagcggctgcacatcctcgacctcagcaccaccttctgcactcagtgg
ccgacgctgctggaggcgctggccacgcgctccgccgacgacacgccgcacctcaccatc
accactgtggctgcggcctcctcatcgatgcaacgggtgatgaaggagataggtcagcgg
atggagaagttcgctcgtctcatgggcgtgcccttccgcttcaacgtcgtccaccatgcc
ggcgacctatcctctctcgacctcgacaccctcgacctgcgctgcgacgattccgtttcc
ggcctcgcggtgaattgtgtcaacgccctccacgccatctcaccgagcggcggccggagg
ggtggcttcctggccgccatccggaggctgcggcctcggatcgtgacggtcgtggaagag
gaagccgaccttgcgggggtggacggtggcgacgagccggaggaaggggaggcgttcatg
aaggtctttcaggagagcttgcgattcttcacggcttacatggagtcgctggaggagagc
ttcccacgcacgagcaacgagcggctgtcactggagcggacggcagggagggcggtggtg
gatatcgtctcgtgcgcaccgtcggagtctgccgagcgaagggagaaggcggcagtgtgg
tcgagacggatgcgcaccgcaggcttcgcgccatcggccttcagcgaggacgcagccgac
gacgtgagggcgctgctgaggaggtaccgagagggatggtcgatgagatcgtcgaccacg
gacgccgacgacgccggcgtgttcctcgaatggaaggagcaagcggtggtgtgggcgagc
gcctggaagccatga
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