Zingiber officinale (ginger): 122021671
Help
Entry
122021671 CDS
T08725
Name
(RefSeq) beta-adaptin-like protein B
KO
K12392
AP-1 complex subunit beta-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
122021671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122021671
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Others
AP-1 complex
122021671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
122021671
NCBI-ProteinID:
XP_042435754
LinkDB
All DBs
Position
1A:complement(26809646..26820649)
Genome browser
AA seq
897 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLDTLKDLISDNNPMVVA
NAVAALAEIQETSSQPIFEITSQTLSKLLTALNECTEWGQVFILDALSRYKASDAREAEN
TVERVTPRLQHANCAVVLSAVKMILLQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLETFPEEPALV
QLQLLTATVKLFLKKPTESPQQMIQAVLNNATMETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDANQLDPSLLDELLVNIATLSSVYHKIPDAFISRAKSAATKPEDDDFAE
GGETTYSETQSHAIDGTGASPSNVSHAETRQQARATAEISAPVPDVLGDLIGLDNAIVPV
DQPTTPTEPPLPVLLPASTGQGLQISAQLIRQDGQIFYAIMFENNTQVVLDGFMIQFNKN
TFGLAAAGPLQFPPLQPGSSARTLLPLVLSQNISPGPPSTLLQVAVKNNQQPVWYFNDKI
SLHVFFGEDGKMERTNFLETWKSLPDTNEVGKDLTNSTINNVDATIEHLAAANVFFVAKR
RNANKDLLYLSAKIPQGIPFLIELTAVLGIPGVKCAVKTPSPDMAAFFFEAMETLLK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcacgactccaaatacttctccaccaccaagaagggagagatccccgagctc
aaggaagagctcaattcgcagtacaaggataagagaaaagatgccgtgaagaaggtgata
gctgcaatgactgttgggaaagatgtttcatcattgttcacagacgttgtaaactgcatg
caaacagagaatctggaactgaagaaacttgtctatttgtacctgataaactatgcaaag
agtcaaccagatcttgccatactcgctgtgaatacatttgttaaggactcacaagaccct
aatcctctgatccgtgccttagctgtgaggacaatgggctgcatccgtgttgacaaaatc
acagaatacctgtgtgatcctcttcaaagatgtctaaaggatgatgatccttatgtccga
aagacagcagcaatatgtgtagctaaattatatgacataaatgctgagttggtggaagat
aggggtttcttggatacactcaaggatttgatatctgacaacaatccaatggttgtagca
aatgcagttgcagcacttgcagagatccaggaaactagcagccaaccgatctttgagatt
actagtcagacactatcaaagcttctgactgctttgaatgaatgcactgaatggggtcaa
gtattcattttggatgctttatcaaggtataaagcctctgatgcacgagaagctgaaaat
acagtagagagagtaaccccacgccttcaacatgcaaattgtgctgttgtgctttctgct
gtcaagatgatccttctccaaatggaactgataactagtactgacgtgattcgaaatctt
tgcaagaagatggcaccacctctggtaactcttctttctgcagaaccagaaattcagtat
gtagccttgcgcaacatcaatcttattgtgcagaaaagacctacaatacttgcacatgag
atcaaggttttcttttgcaagtataatgatcctatctatgttaagatggaaaaattggag
atcatgataaagctagcctcagatcgaaacatagaccaggttttgttggaattcaaagag
tacgccacagaagtagatgtagactttgttagaaaggccgtacgtgcaattggacgctgt
gccatcaagttagagagagctgctgaacgatgcatcagtgtactgcttgagctgataaag
ataaaagtcaactatgttgtgcaagaagctatcattgtcataaaggatatcttccgacgc
tatcctaacacctacgaatccatcattgcgacattatgtgaaagtttggacacattagac
gagccagaggctaaggcatcaatgatatggataatcggtgaatatgctgaaaggattgac
aatgctgatgagctccttgagagctttctagaaactttccctgaagaacctgcactagta
caattgcaactgctcactgcaacggtcaagctgttccttaagaagccaactgaaagcccg
cagcagatgattcaggctgttcttaataatgcaacaatggagacagacaaccccgatttg
cgtgatcgtgcatacatttattggcgtctcctttctactgatcctgaggctgctaaagat
gttgttttagctgaaaaaccagtaatcagtgatgatgcaaaccaacttgatccctcactt
ttggatgagcttcttgtaaatattgccaccctttcttctgtttaccataagataccagat
gcttttataagccgtgcaaagtcagctgcaactaaaccagaggatgatgattttgctgag
ggaggagaaacaacttattctgagacacagtctcatgctattgatggtacaggtgcttct
cctagtaatgtttctcatgctgaaacaagacagcaggcacgagcaacagctgaaatctct
gcgcctgtgccagatgtattaggagatttaattggtcttgataatgctattgtgcctgta
gaccagccaacaacacctactgaacctcccttacctgtattgcttcctgcatctactgga
caaggtttacagataagtgcacagctgattcgccaagatggccagatattttatgctata
atgtttgagaacaacacacaggttgtattagatggattcatgatacagtttaacaaaaat
acattcggtcttgcagctgcagggcctctgcagttcccgccgttgcaacctggatcttca
gcgagaacccttcttcctctagttttatcccagaatatctcacctggccctcctagcaca
cttttgcaagttgcagttaaaaataatcagcagccagtctggtatttcaatgacaaaatt
tcactgcatgttttctttggcgaagatggtaaaatggaacgcacaaattttcttgagaca
tggaagtcccttccagacacaaatgaagtggggaaggacttgacaaattccaccatcaac
aatgttgatgctacaattgaacacttagctgctgccaacgtcttcttcgtcgcaaaacga
aggaatgccaacaaagatctgttgtacttgtcagccaaaattcctcaaggaattcctttc
ctcatagagcttactgctgttcttggtattcccggagtaaaatgtgcagtgaagacacca
agcccagatatggcagcattcttctttgaagccatggagaccttgctgaagtga
DBGET
integrated database retrieval system
