Zingiber officinale (ginger): 122021679
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Entry
122021679 CDS
T08725
Name
(RefSeq) protein BTR1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122021679
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122021679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_NusA_1st
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
122021679
NCBI-ProteinID:
XP_042435764
LinkDB
All DBs
Position
1A:26881255..26889519
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AA seq
341 aa
AA seq
DB search
MESPKQHRDSSPDTAPRRSHPPRSPTAGDEEKQTHIRILVSNTAAGCIIGKGGSTISEFQ
SQSGARIQLSRNHEVFPGTSDRILLISGALGDVIKAMELIQEKLLSELEDGNDAEGRSKV
RLIVPNSSCGALIGKGGSTIKSFIEESRAGIKISPQDNNAGLNDRLVTLTGSFEELMRAI
FLILSRLIEDAHYPQTLNSPYQYSGINFPGVPVGYMIPSVAYSPVTYRPNGSGGKYSNNK
MQGAASPAVLHPSRSPGRPLEAQSNSVTIGIADEHIGAVVGRGGRNIMEISQVSGARIKI
SDRGDFISGTSDRKVTITGSPEAIGIAESMIMQKVSSNTDG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccccaagcagcaccgcgattcatcccccgatactgctccacgccgttcgcat
ccccccagatctccaaccgcaggggatgaggagaagcaaacccacataagaattcttgta
tcgaacacagcagctggttgtatcattggaaagggtggatctacgatatctgaatttcag
tcacaatcgggagctcgtattcagctgtcacgtaatcatgaagtttttccaggaacatca
gatagaatactattgatttctggggcacttggagatgtaataaaggctatggaattgatc
caggaaaaattgcttagcgagttggaagatggcaatgatgctgaaggtagatcaaaagtc
aggcttattgttcctaatagctcatgtggtgctctaattggaaaaggaggttcaactata
aagtcatttatagaagaatcaagggctggtatcaagatatctcctcaggataataatgcc
ggcctaaatgataggctagttactttgacgggatcttttgaagaactaatgcgtgcaatc
tttttgatattgtcaagattaatagaagatgctcactatccacagacattgaactcacct
taccaatattcaggtattaattttcctggtgttcctgttggatatatgattccttctgta
gcatacagtcctgtgacttacagaccaaatgggtctggaggaaagtattcaaataacaag
atgcagggtgcagcttcacctgctgttttgcatccatcacggtcacctggcaggcctctt
gaagcccagagtaattcagtgacaattggaattgctgatgagcatattggtgctgttgtt
ggccgtggaggaaggaacataatggagatcagtcaggttagtggggccaggatcaagata
tcagatagaggtgatttcatttctggcacgtcggataggaaagtaactattactggatca
cctgaagcaatcgggattgctgagtccatgatcatgcaaaaagtttcttccaacacagac
ggttga
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integrated database retrieval system
