Zingiber officinale (ginger): 122021701
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Entry
122021701 CDS
T08725
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP18-2-like
KO
K12733
peptidyl-prolyl cis-trans isomerase-like 1 [EC:
5.2.1.8
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122021701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122021701
03110 Chaperones and folding catalysts [BR:
zof03110
]
122021701
Enzymes [BR:
zof01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122021701
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19-related factors
122021701
Complex C
122021701
Chaperones and folding catalysts [BR:
zof03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122021701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
122021701
NCBI-ProteinID:
XP_042435790
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All DBs
Position
9A:complement(23333054..23338560)
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AA seq
164 aa
AA seq
DB search
MWGSADGGRPEVTLETSMGPFTVEMYYKHAPKTCRNFVELSRRGYYDNVKFHRIIKDFIV
QGGDPTGTGRGGESIYGPKFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPCQPL
DGKHTIFGRVCKGMEVIKRLGSVQTDNSDRPIHDVKILRTIVQD
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggagcgccgacggcggccggccggaggtgaccttggagacctccatgggacct
tttacagtcgagatgtactacaagcacgctccgaagacttgcaggaactttgttgagctc
tctaggagaggttattacgacaacgtcaagttccaccgaatcatcaaggattttattgtc
caaggcggtgatccgacagggactggaaggggtggcgaatccatttacggtccaaagttc
gaggacgagataaaacctgagttgaagcatactggagcgggcatactatcaatggcaaat
gctggtcctaacacaaatggtagccaattttttataacattggcaccatgccagccattg
gacgggaagcataccatttttggtagagtctgtaaggggatggaagtaattaaacgtctt
ggaagtgtgcaaactgacaacagtgataggccaatacacgatgtgaagatactaagaaca
atagtccaagattga
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