Zingiber officinale (ginger): 122021849
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Entry
122021849 CDS
T08725
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122021849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122021849
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122021849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
122021849
NCBI-ProteinID:
XP_042435949
LinkDB
All DBs
Position
9A:33419441..33429598
Genome browser
AA seq
1694 aa
AA seq
DB search
MASFQPLGGSSRSGRILAPALDKIIKNAAWRKHSNLVSACKAALDRLETFSDSPDHSSPL
LGIPPPDADFVLHPLVLAIESAYPKVTETALECAQKLFSHGLLRGDINLPADADNTLGSS
ASRLLTSVCSCCGIGDEALELSMLRVFIASVRSPFVLIRDECLAQIIRSCYNVYLGSQSG
ANQLCAKLVLAQIVVIMFTRVEADSPDVRIRIVSIADMMDLSDRNLNDSSLVQSAQNFIN
EVMAGRDADPLPSKSNKEVSLLRDAKGEAVANGGGLSKIREDGLFLFKNLCKLSMKFSTQ
ENPEDPLLMRGKVLSLELLKIGIETAGPLWRANEWFLGAIKQYLCLSLLKNSALSVMSIF
QLLCSIFMGLLSKFRSGLKEEVGIFFPMLILRILENILQPSFLQKMIVLDLLEKICQVSQ
IMVDIFVNYDCDVNSPNIFERVVNGLLKTALGVPPGSATSLSPAQNTTLRIESVKCLNCI
IKSMGVWMDQQLRLGDFAPESRENEHSSENLTSLNGEEGSVADHDLHSDANHEPSDTASL
EQRRAYKLEFQKGVALFNKKPSKGIDFLIKIKKIGASPEEVASFLKNASGLNPSVVGDYL
GEREDFSLKVMHAYVDSINFEGMNFGEAIRFFLKGFRLPGEAQKIDRIMEKFAERYSKCN
PSSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMSKSEFIRNNRGIDDGKDLPEEYLGSLY
DQIVKSEIKISADISTPQNKQTNGINKLLGFDNIFNLVNWKQSEEKALGASDHLIKHIQE
QFKAKSGKSESMFYTVTDTAILRFMMEACWAPLMAAFSMTLDQSDDMSATAQCLQGFRYA
VHVTSVMHMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIGDGNYLQESWEH
IFTCLSRFEHLHLLGEGAPPDSSFFTAPLTEAEDRAQKITSVKKKGNALQNPAVMAVVRG
GSYDSASMGNKVSALVTPDQMNNFISNLNLLDQIGTFELNHIFAHSQRLNGDAIVAFVRA
LCKVSMTELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSCIWNVLSEFFVSVGLSENLSV
AIFVMDSLRQLAMKFLEREELANYNFQNEFLKPFVVIMQKSNSSEIRELIVRCVSQMVLS
CVNHVKSGWKSVFMVFTTAAADERKSIVLLAFETMEKIVRDYFPYITETETTAFTDCVKC
LIAFTNSRFNSDASLNAIAFLRFCAVKLAEGGLVCYDNISEGHLGNRDGSDGNLTEKDDL
AFFWLPLLKGLSKLTSDTRPTIRKGALEVLFDILNDHGHLFTDTFWINILKLVIYPIFSN
TRNTTVGQVLSVHDSLFPDNDSAKSETDTLAAKCLIDLFVNFFEVLQSHLGNVVGIVTSF
VSSPYKQYANAGMAALLHLTTHLGSKLSEEEWKDILVPLKKSAASMLPVFSSIIRVMQDI
EIPDRSHSDEERYSDHEYINEDEEEANMETTSYAIVRMKNHISVQLQIVQVVKKLYEVHR
KCFSAAHVSILLDILTSIASHSSEVSSETTTHQKLQKACSLLEIPDPPVVHFENESYRNL
LKFLQTILIEDPALSDELKIESLVVFVCQKIFKIYLNCAGRQPTDCEISDAVPTVHGILH
LGSAKKEELAARTSLLVLALQVLGGLRQDSFRRNLRIVFPSMVSLVSCEHSSNAVQDELH
DIFHTSIGPLLMNI
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttccaacctctcggcggtagctcccgctccggccgcatcctcgcccccgcc
ctcgacaagatcatcaagaacgccgcctggcgcaagcactccaacctcgtctccgcctgc
aaggccgccctcgaccgcctggagaccttctcagactcccccgaccactcctcccccctc
ctcggcatccctcctccagacgccgacttcgtcctccaccccctcgtcctcgccatcgag
tccgcctatcccaaggtcaccgagaccgccctcgagtgtgcccagaagcttttctcccac
ggcctcctccgcggcgacatcaacctccctgccgacgccgataatacgctcggctcttcc
gcctctcgcctcctcacgtccgtctgctcctgctgtgggatcggcgatgaagccctagag
ctctccatgctcagggtctttattgcctccgtccgttcgcccttcgtgctgatccgcgac
gagtgcttggcccagatcatccggagctgctacaacgtgtaccttggcagccagagcgga
gccaatcagttgtgtgccaaattggtcctagctcagatcgtcgtcatcatgtttactaga
gtggaggctgattccccggatgtcagaatccggattgtttctattgccgacatgatggat
ctatcagataggaacttgaatgattccagtctggtacagtccgcgcagaattttattaat
gaggtaatggcaggaagagacgcagaccccctgccttctaaatcgaacaaggaggtttct
ctgctccgcgatgcaaaaggagaggcggttgcaaatggcggtggattgagcaagatcaga
gaggatggtttgtttcttttcaaaaacttgtgcaagctctcaatgaagttctccacgcaa
gagaatcctgaggaccctctcttaatgagggggaaggttttgtcgctggagcttctaaag
ataggaatagagactgctgggcctctttggcgggcaaatgagtggtttcttggagctatc
aaacaatacctttgtttatccttattgaagaacagtgcactatcagtgatgagtattttt
cagcttctttgctctattttcatgggcttattgtcaaaatttagatcagggctgaaggag
gaagttggaattttctttcctatgcttatcctccgtatccttgaaaacattcttcagcct
agctttttacagaaaatgattgttctcgacctattggaaaagatctgccaggtttcgcag
attatggttgacatttttgtgaattatgattgtgatgtgaattcaccaaatatctttgaa
agggttgttaatggtcttctgaagacagctctaggtgttcctcctggatcggcaacatcg
ctatccccagcacagaataccacattacggattgagtcagtgaagtgtctcaattgtatc
attaaatcaatgggtgtatggatggaccagcagctgagattgggtgattttgctccagag
agtcgtgaaaatgagcattcttcagagaatcttacttctttgaatggtgaggaaggaagt
gtggctgaccatgatctgcattcggatgcaaaccacgagccctctgatacagcttcactg
gaacaacgcagggcatataagttggagtttcagaaaggcgtcgcattgtttaataaaaaa
ccttcaaagggtattgattttctaatcaaaatcaagaaaataggcgcgtctcctgaagaa
gtagcttccttcttgaagaatgcttctggtctaaatccatctgtggttggagactatttg
ggtgaaagggaagacttctctttgaaagtaatgcatgcatatgttgactcaataaatttt
gagggtatgaattttggtgaagctattaggttcttcttaaaaggtttcagattgcctgga
gaagcacagaaaattgaccgcataatggaaaagtttgcagaacgttacagtaaatgcaac
ccgagttcttttaccagtgcagatactgcttatgttcttgcttattctgtgattatgttg
aacactgatgcacacaacaacatggtcaaagataagatgtcgaaatctgagttcattcgc
aacaatcgaggaatagatgatggaaaggatttaccagaagaatatcttggttctttgtat
gatcaaattgtgaaaagtgaaataaaaatcagtgctgatatttctactccacaaaataaa
cagacaaacggcatcaacaagcttttgggatttgacaacattttcaatttggtcaattgg
aagcaatctgaagagaaggcattaggagcgagtgatcatcttattaagcacatccaagag
caatttaaagcaaaaagtggaaaatcagagtctatgttctatactgtcacggatacagcg
atcctaagattcatgatggaggcttgctgggctcccttgatggctgctttcagtatgaca
ctcgaccaaagcgatgacatgtctgccacagcacagtgtttgcaaggcttccgatatgca
gtgcatgtcacctcagtgatgcatatgcagacacaaagagatgcttttgttacgtcagtt
gctaaattcacatacctccattgtgctgctgatatgaagcagaagaatgttgatgctgtt
aaggctataatatcaattgccattggagatggtaattatctacaagaatcctgggagcac
atatttacatgtctttcacggtttgagcatttgcacctactaggagagggtgcaccaccc
gattcttcattctttacagcaccactcactgaagcagaagacagagcacagaaaataaca
tccgtgaagaagaaaggaaatgctcttcaaaatccagcagtgatggcagtggttcgaggg
ggttcttatgatagcgcatccatgggaaataaggtttccgctttagttacaccagatcag
atgaataacttcatttccaatttaaatctgttggaccagattggtacttttgagctaaac
cacatatttgctcatagccaaagattgaatggtgatgcaattgtagcttttgtgagggcc
ctgtgtaaggtttcaatgacagaattgcaatctccaacagatcctcgtgttttcagcctc
acaaaaatagttgaaattgcgcattacaatatgaatcgtatacgattggtttggtcctgc
atctggaatgttctttctgaattttttgtttcagttgggttgtcagaaaatctttcagtc
gcaatctttgtaatggattcactaaggcaattagctatgaaatttttggagcgagaagaa
cttgctaattataacttccagaatgaattcttgaaaccttttgtggtcatcatgcagaaa
agtaattcttctgaaattcgtgagcttattgttcgatgtgtttctcagatggttttgagt
tgtgttaatcatgtgaagtctgggtggaaaagtgttttcatggttttcacaactgctgct
gccgatgaacgtaagagtattgtactgttagcttttgagaccatggagaaaatagttaga
gattactttccttacataactgagactgagaccacagcattcactgactgtgtgaagtgt
ctgattgcatttacaaatagcagattcaatagtgatgctagcctcaatgccattgcattt
ctccggttttgtgctgttaaactcgcagaaggaggcctagtgtgctatgataacatttcc
gagggccatttagggaacagagatggttctgatggaaatttgactgaaaaagatgatctt
gctttcttttggctaccgttactaaaaggtttatcaaagttgacctccgatactcggcca
actatcagaaaaggtgctctggaagtactcttcgatattctgaatgaccatggtcacctt
tttactgacaccttctggatcaatatcctgaagcttgtgatttaccccatttttagcaac
acacggaatacaactgttggtcaagttctatcagttcatgattctctgtttcctgacaat
gattctgcaaaatctgaaactgatactttggcagcaaaatgtttgattgacctatttgtc
aatttttttgaggtattgcagtcacatcttggaaatgttgtaggtattgttacaagtttt
gtgagcagcccctacaagcaatacgctaatgcaggaatggctgccctactccatttaact
acccatctgggaagcaagctatcagaagaagaatggaaagatattttggtacccttgaaa
aagtcggctgcttcgatgctgcctgttttttctagtatcataagggtcatgcaagatatt
gaaattccggatagaagccattctgacgaagaacgatactctgatcatgaatacattaat
gaggatgaagaggaggctaatatggaaacaacatcttacgcaattgtcagaatgaagaat
cacataagcgttcagctccagattgtacaggttgtgaagaaactttatgaagttcatcga
aagtgcttttcggctgctcatgttagcatcctactggacatacttacatccatcgcttca
cattcaagcgaagtgagcagcgaaaccaccacacatcagaagttgcagaaagcttgctcc
ctcctggaaattcctgatccaccagttgttcattttgagaatgaatcttaccggaacctg
ctcaagttcttgcaaaccatactcatcgaagaccctgctctgtccgacgagctaaaaata
gaatcgcttgttgtgttcgtttgccagaaaatattcaagatctatttaaattgtgccgga
cgacaaccaaccgattgtgagatttcagatgccgtcccaaccgttcatgggatactccat
ttgggcagtgctaagaaagaggaactagctgcgcggacatcattactggtgctggccttg
caagtcctaggtggcttgaggcaggattcattccgaaggaacttgcgtattgttttccca
tcgatggttagccttgtaagctgcgagcacagctccaacgcagtgcaggacgagctacat
gatatctttcatacatcgataggaccactattgatgaacatatga
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integrated database retrieval system