Zingiber officinale (ginger): 122021921
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Entry
122021921 CDS
T08725
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122021921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122021921
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
122021921
Complex B
122021921
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
122021921
NCBI-ProteinID:
XP_042436033
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All DBs
Position
9A:complement(38729748..38737218)
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AA seq
506 aa
AA seq
DB search
MGDFNDPLNRNNPQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRLPLEYKPPPE
KRKCPPYTGMAQFVSHFAEPTDPEYAPPIVEGETRVQRRARIRQVRLEEGARQVAESLEK
YDPSKDPNATGDPYKTLFVARLNYETTEHRIKREFETYGPIKRVRLVTDKETNKPRGYAF
IEYVHTRDMKSAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRTGGEELAQ
KHSGREQQQLTSDHSRSEEPRAREKSRDRGRDRERDDRPHERSHERTREPREDRHHHQKD
RDRNRERERDKEKDKERERERDRGRDRDRARGKERERDRGRDYDRERERDRPRDRDRERE
RDYDQAGYERERGYFHDKDSEYGNESKHGRERSGARDRNIEHGNGQEWYDGLRNPEHERD
YNQYDESQGQKQYDHPPPVKPVEHIERSKRHEMDYYEHGSYDQRQPDYYQNQYGYADADQ
REEGEAVGDDYGYHPSGRSLSRERQA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttcaacgaccccctgaatcgcaacaacccccaggcccgcaccaaagcccag
aatcgagccaacgtcctccagttgaagcttattgggcaaagccatccaactggccttact
gctaatctattgaagctttttgagccacgtctgccgttggagtataaacctcctccagag
aaaaggaaatgccctccctacactgggatggcacaatttgttagccattttgctgaacca
actgatcctgaatatgctccgccaatagttgagggtgaaactcgggtccaaagaagagct
agaattcgacaagtacgccttgaagagggtgcaagacaggttgctgaaagcttggaaaaa
tatgatccatctaaagatccaaatgctaccggtgatccatacaagacactttttgttgcc
aggcttaactatgaaacaactgaacaccggatcaagagggagtttgaaacttatggacca
attaagagggtacgtttggttacagataaggaaacaaataaaccaagaggatacgcgttc
attgaatatgtgcatacacgtgacatgaaatccgcatacaagcaagctgatggaaggaaa
ctcgataatagacgagttcttgttgatgttgagcgtggaagaactgtgccaaattggagg
cctcgaagattgggtggtggacttggtacaaccaggactggaggtgaagaattggcccag
aagcattccggcagggagcagcaacaacttacttcagatcattctagatcagaggagcca
agggcaagggagaaatctcgagatcgggggcgggatcgtgagagagatgacagacctcat
gaacgttcccatgaaaggacccgggagccgagagaggacaggcaccaccatcaaaaggat
cgagatagaaacagagaaagagagagagacaaggaaaaggataaagagagagagagggag
agagatcgtggtcgagaccgtgatcgagctcgtggcaaagagagggaaagggaccgtggt
cgtgattatgaccgtgagcgcgaacgtgatcgtccacgtgatagagaccgggagcgagaa
agggactatgatcaagccggttatgaaagagaacgcggttattttcatgacaaggattct
gaatatggtaatgagtcaaagcatggcagggagaggtctggcgcaagagacagaaatatt
gagcatggaaatgggcaagaatggtatgatggactacgaaatccggagcatgaacgcgac
tacaatcagtatgatgagtcccagggtcagaaacagtatgatcatcctccaccagttaag
cctgtggaacacattgagaggtcaaagcgacatgaaatggattattatgaacatgggtct
tacgatcagcgtcagcctgattattatcaaaatcaatatgggtatgcagatgcagatcaa
cgtgaggagggtgaggcagtaggagatgattatggataccatccttccggtaggtccctg
tccagggagcgacaagcttaa
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