Zingiber officinale (ginger): 122021933
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Entry
122021933 CDS
T08725
Name
(RefSeq) DNA replication licensing factor MCM3-like
KO
K02541
DNA replication licensing factor MCM3 [EC:
5.6.2.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122021933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122021933
03036 Chromosome and associated proteins [BR:
zof03036
]
122021933
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122021933
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
122021933
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122021933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM_N
WH_MCM3_C
Mg_chelatase
AAA
AAA_3
AAA_5
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
122021933
NCBI-ProteinID:
XP_042436051
LinkDB
All DBs
Position
9A:55813119..55819025
Genome browser
AA seq
765 aa
AA seq
DB search
MDVNEEAMAAHKSTFRDFLEQHGSYMDSVRQLAECNGRRLIIATDDLRSYSLDFARRLIR
SPAEYIQPISDAVTEEARRVNPKLKERYRVQVGFKGPFGFHRVTPRDLMSSFIGSMVCVE
GIVTKCSLVKPKVVKSVHYCPATKQFTFREYRDITSTAGLPTGSAHPTRDENGNLLVTEH
GLCEYKDHQTLSMQEMPENSAPGQLPRTVDVIVEDDLVDSCKPGDRVAIVGVYKAFPGKS
KGSLNGVFRTILIANHVSLLNKGAHAPNISIQEAKKIKEIAKRSDAFDLLGNSLAPSIYG
HLWIKKAVILLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTS
GRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVICIDEFDKMNDLDRVSIHEVMEQQ
TVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQM
DPEIDRQISEHVSRMHRYCADDRGIGGHEKSVRYTEDDDGDVDTSVFVKYNRALHGQERK
KGKKQKHERLTINFLKKYIYYAKNIYQPKLTDEASEHIATSYAELRDAGANAKHGGGTLP
ITARTLETIIRLSTAHSKMKLRTEVLKADVEAALQVLNFAIYHKELTDMEEREQRELEMK
QKTDHDTDQNEYPDGSRSMVEPMDVDADHGVNEVELPPDRIEAFEAILGQHVMLNHLDQI
SIDEIEGLVNRETTNRYTRRQISFILERMQDSNRIMIMEGVVRII
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaacgaggaggcgatggccgctcacaagtctacgtttcgcgatttcttggag
caacatggttcttacatggattccgtgaggcaattagccgagtgtaatggccggcgtctc
atcatcgccacagacgaccttcgtagttatagtctcgatttcgctcgaaggttgatccgt
agtccggcggagtatatccagccgatctccgacgcggtgacggaggaagcgcgcagggta
aaccctaagttgaaagaacggtatcgcgtgcaagtgggctttaaaggaccctttggtttc
catagggtcacacctagggatctgatgtcctccttcatcggctccatggtttgtgtggaa
ggcatcgtcactaaatgttctcttgtaaagccaaaggtagtcaaaagtgttcactattgt
cccgccacaaaacaattcacatttcgtgagtacagggacattacgtcaactgctggcttg
cctacaggttctgctcatccaaccagggatgaaaatggcaatctattggtaactgaacac
gggctctgtgagtataaggatcatcaaactttgtccatgcaagaaatgcctgaaaattct
gcccctggccagcttccaaggactgtggatgtaattgttgaagatgatcttgttgattct
tgcaaacccggtgatcgagtagcaatcgtaggggtttataaagcattccctgggaaaagc
aaaggcagcttgaatggagtcttcaggactattctcatagccaaccatgtttctctttta
aacaaaggtgcacatgcgccaaatatttctattcaagaggcaaagaaaataaaagaaata
gcaaagagaagtgatgcatttgatctgctcgggaattcgcttgcaccctcaatatatggt
catctgtggatcaaaaaggcagtcatcttactgatgcttggtggcgttgaaaagaatttg
aaaaatggaactcatttaagaggtgacataaacatgatgatggttggcgatccatcagtt
gccaaatcccaactgctaagagctatcatgaatattgcaccacttgctatctcgacgtct
ggtcgaggctcctcaggtgttggcttgacagctgctgtcacttctgatcaagaaactggt
gagagaaggcttgaagctggtgcaatggttctagctgatagaggagttatatgtattgat
gagtttgataagatgaatgatctagatcgcgtttccatacatgaagttatggaacaacag
acagtgacaattgccaaggcaggcattcatgcatcactaaatgctagatgcagtgtagta
gctgctgcaaatcctatttatggaacttatgatcggtcattgacacccacgaagaacatt
ggacttcctgattcactgctttctcgttttgatttgcttttcattgtccttgatcaaatg
gatcctgagatcgaccgtcaaatttcagagcatgtctctagaatgcacagatattgtgca
gatgacagaggcattggagggcatgaaaaatctgtgagatatactgaagatgatgatggt
gatgttgatacatctgtctttgttaagtacaatcgagctctccatggacaagaaaggaaa
aaggggaaaaagcaaaaacatgagagactaactatcaatttcctcaagaagtacatctac
tatgcaaagaacatttatcaaccaaagcttactgatgaggcatccgagcatatagcgaca
tcttatgcggagcttagggacgctggcgcaaatgcaaagcatggaggaggtacacttcca
attactgcaagaaccctagagaccataattcgtctctcaactgctcatagcaaaatgaaa
ctgaggaccgaggttttgaaagctgatgttgaggctgcattgcaagtcctcaacttcgcc
atatatcacaaagaactaactgacatggaagagcgtgaacaaagagaactagaaatgaag
caaaaaactgatcatgacactgaccagaatgagtatcctgatggcagcagaagtatggtg
gagccaatggatgtcgatgctgatcacggtgtgaatgaagtcgagctacctcctgacaga
attgaagcatttgaagcgatcttaggccagcatgttatgctcaaccacttggatcaaatt
tccatagacgaaatcgaaggattagtcaatcgggaaacaacaaaccgctacacaagacgc
cagatatcattcatcttggagagaatgcaggactccaacagaattatgatcatggaggga
gtggttcgaatcatttaa
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