Zingiber officinale (ginger): 122022269
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Entry
122022269 CDS
T08725
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122022269
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122022269
NCBI-ProteinID:
XP_042436159
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Position
9B:35858343..35860606
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AA seq
610 aa
AA seq
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MPEAGKITPPEAHLKALEFIEHVTANADVVQRRVLGEILGQNAAAEYLRRHGLSGRAGAD
PDAFKRLIPVVTYEDLQPDILRVAHGDTSPIFSGRPISEFLTSSGTSGGERKLMPTIEEE
LDRRSLLYSLLMPVMGQFVPGVDGRKGMYLLFVKAETQTPGGLVARPVLTSYYNSRHFLD
RPRDDPFNSYTSPNEAVLCPDPYQSMYSQLLCGLVQRDEVVRVGAVFASGFIRALRFLEK
HWRSLCRDIRDGELDPAHVTDGGVREAVSRVLCRPDPDLALRIEAECQQSSWKGIIPRLW
PGTKYVDVIVTGAMAQYIPTLEFYSGGLPLVSAMYASSECYFGINLNPLCDPSDVAYTLI
PTMAYFEFLDLQHSSNDKADVDDLVDLVDVKLGHEYELVVTTYPGLYRYRIGDVLRVSGF
KNKAPQFKFVRRKNVVLSLDAEKTDEVELQGAVGAAARNLEQFGAALADYTSYAETGGSS
GPGHYVLYWELLGGDRDRSPVLAAAMEDCCMAVEEALNSVYRQGRACDQSIGPLEIREVE
KGTFDKLMDYALSQGASFNQYKAPRCVQAGPLVELLDARVKASYFSPNCPNWRPGHKQWT
NNHDEDHNPV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggcagggaagatcacgccgccggaggcgcacctaaaggcgctcgaattcatc
gagcacgtcacggcgaatgctgacgtcgtccaacggcgtgtgctgggcgaaatacttggg
cagaacgccgccgccgagtacctccgccggcatggcctctccggccgcgctggggccgac
cccgacgcgttcaagcgtctcatccctgtcgtcacctacgaagacctgcagccggacatc
cttcgcgtcgcccacggcgacacctcccccatcttttccggccgccccatctcagagttc
ctcacgagctcggggacctcgggaggggagcggaagctgatgccgacgatcgaggaggag
ctcgaccggcgaagtctgttgtacagtttgctaatgccagtgatggggcagttcgtgccg
ggggtggacggaaggaaggggatgtacctgctgttcgtgaaggcagagacacagacgccc
ggcggtctcgtggcccgcccagtgctcaccagctactacaacagtcgccacttcctcgac
cggccacgcgacgatcccttcaactcctacaccagccccaacgaggcggtgctctgcccg
gacccctaccagagcatgtactcccagctgctctgcggcctcgtccagcgcgacgaggtg
gtccgagtcggcgctgtcttcgcctccggattcatccgcgccctccgcttcctcgagaag
cactggaggagcttgtgccgcgacatccgcgacggcgagctcgacccggctcacgtcacc
gacggcggcgtgcgcgaagcagtctcgcgcgtgctgtgccgtcctgacccagacctcgcg
ttgcggatcgaggccgagtgtcagcagagctcgtggaagggcatcatcccgcggctctgg
cctgggaccaagtatgtcgacgtcatcgtgacgggcgccatggcgcagtacatccccacc
ctcgaattctacagcggcggcctccctctggtctccgccatgtacgcctcctccgagtgc
tacttcggcatcaatctcaaccccctttgcgaccccagcgacgtcgcctacacgctcatc
cccaccatggcctacttcgagttcctcgacctccaacacagcagcaacgacaaagccgat
gtcgatgacctcgtagacctcgtcgacgtcaaactcggccacgagtacgagctcgtcgtc
accacctatcccgggctgtataggtacagaatcggcgacgtgctgcgggtgtcgggattc
aagaacaaggcgccgcagttcaaattcgtgcggcggaagaacgtagttctgagcctcgat
gcagagaagacggacgaggtggagctgcagggggcggtgggcgcggctgctcggaacctc
gagcagttcggcgcggcgttggcggactacacgagctacgctgagacgggcgggagctcg
ggtccggggcactacgtcctgtactgggagctgctgggcggggatcgagatcggtcgccg
gtgctcgcggcggcgatggaggactgctgcatggcggtggaggaggcgctgaacagcgtg
taccggcagggccgggcgtgcgaccagtcgatcgggccgctggagatccgcgaggtggag
aaggggacgttcgacaagctgatggactacgcgctgagccaaggcgcgtccttcaaccag
tacaaggcgccgcggtgcgtgcaggcggggccgctggtggagctgctcgacgcgagggtc
aaggcctcttacttcagccccaactgccccaactggaggcccggccacaagcaatggacc
aacaaccacgacgaagaccacaaccccgtctaa
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