Zingiber officinale (ginger): 122022342
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Entry
122022342 CDS
T08725
Name
(RefSeq) transcription factor E2FB-like isoform X1
KO
K06620
transcription factor E2F3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122022342
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
122022342
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
COG3_N
TrmB
DUF2250
Motif
Other DBs
NCBI-GeneID:
122022342
NCBI-ProteinID:
XP_042436242
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Position
1A:29472986..29478634
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AA seq
459 aa
AA seq
DB search
MSGCRTSGDRLARPCGQIPQSLKHRRLLLSSASKASLVEDNRFPAADGRAAGTEVADSVV
VNTPLKRKPEHGDNEASELSELKITPGSAEVVNNPLVRLTKKSYSRPKVSKHNKSDVQDS
LSNAAGSPSCNALTNVGTCRYDSSLGLLTKRFINLLKHAQDGTLDLNKAAETLVVQKRRI
YDITNVLEGIGLIEKNLKNKIRWTGLDDKMPGEVQNDLPLLQAEVEKLVLQENQLDECIS
KMQERMRVFTETESNQKLLYLTIDDIKSVPCFQNQTLIAIKAPHGTTLEVPDPDEAFEYP
HWRYRIVIRSTMGPIDIYLVSKFEKNFEEMSSVETPLRTDEMVSSGSLEAAILAVATDES
KDEKMEFKNQDRQGCLDASSSEDTGCGMTKIVPSEIDTDADYWLQSDFGASITDLWNTPQ
SQWDRYRTDDFTTDNTSTAEHQTPCGTIDPPTHAPLQKL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctgtcgaacttctggggaccgactggcgcggccgtgcggacagatccctcaa
tcgctgaagcaccggcgactgctgttgtcctcggccagtaaggctagcctggtcgaggac
aaccgcttccctgctgctgatgggcgtgcagccggcactgaggtggctgattccgtggtc
gttaatacgcctctgaagagaaagcctgaacatggagataatgaggcttctgagttgagt
gagctgaagataactccaggctctgctgaagtagttaacaatcctcttgttagactgacc
aagaaaagttatagcagacctaaggtatccaagcacaacaaatctgatgtccaagattct
ctatcaaatgctgcaggttcgccttcatgcaatgctcttactaatgttggtacttgccgt
tatgatagctctttaggactcttgaccaaacggtttatcaatttgcttaaacatgcacaa
gatggcactcttgatttgaataaagcggcagaaacacttgtggtgcaaaagaggcgaatt
tatgacatcacaaatgtgcttgaagggataggactgatagaaaagaatctcaaaaacaaa
attcgttggactggcttagatgataaaatgccaggagaggttcaaaatgatctgccattg
ctgcaggcagaagttgaaaaattagttttgcaagagaatcagttggatgagtgcatcagc
aaaatgcaagaaaggatgagggtgttcactgaaacagaaagtaatcaaaagctgctttat
ctgacaatagatgacatcaaaagcgtaccttgctttcagaatcagacgcttatagcaata
aaagcacctcatggtactaccctggaggttccagatccagatgaggcttttgaatatcca
cattggagatacagaattgtcatacgaagcacaatgggtcctattgatatttaccttgta
agtaaatttgaaaagaattttgaggagatgagtagcgttgagacccctttaagaactgat
gagatggtaagttctgggtcactggaggccgccatcttggcagttgcaacagatgagagc
aaagatgagaaaatggaattcaagaatcaagatagacaggggtgccttgatgcaagttcc
tcagaggatactggctgtggtatgacaaaaattgtaccttctgaaattgatactgatgct
gattactggcttcaatcagattttggagctagcattacagatttatggaacacgccgcaa
tcacaatgggacaggtacaggacagatgacttcactacagataacactagcacggctgag
caccaaactccatgtggaactattgaccccccaacacatgctccgctccaaaagctatga
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