KEGG   Zingiber officinale (ginger): 122022403
Entry
122022403         CDS       T08725                                 
Name
(RefSeq) ras-related protein RABF1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04144  Endocytosis
zof04145  Phagosome
zof04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122022403
   04145 Phagosome
    122022403
   04148 Efferocytosis
    122022403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122022403
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122022403
   04031 GTP-binding proteins [BR:zof04031]
    122022403
Membrane trafficking [BR:zof04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122022403
 Endosome - Lysosome transport
    122022403
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122022403
  Exosomal proteins of other body fluids (saliva and urine)
   122022403
  Exosomal proteins of colorectal cancer cells
   122022403
  Exosomal proteins of bladder cancer cells
   122022403
GTP-binding proteins [BR:zof04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122022403
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA RsgA_GTPase GTP_EFTU MMR_HSR1 AAA_7 Corazonin TniB
Other DBs
NCBI-GeneID: 122022403
NCBI-ProteinID: XP_042436326
LinkDB
Position
9B:2828632..2841016
AA seq 260 aa
MGCSSSLPDRNAGSLGGLNAENSMATDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTLALQNSTTVKFEIWDTAGQERYASLAPLYYRGAAVAVVVYDITSEET
FRKAQYWVKELQKHATPGIVMALVGNKADLQENRVVSSQDAMEYAERNGMFFMETSAKTD
NNINELFEDVQVSTAQHNHTPPTPSALHSYLKFVHQSSIIHTSICYHSHYCLADPSKYRI
TKPKFSPRGLVRQTDEFYQQ
NT seq 783 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctctcttccagacagaaatgctggaagtttgggtggtttgaatgct
gaaaattcaatggccacagacccaaaaaacttgcgtgtcaagttggtattgttaggtgat
tctggtgttggtaaaagctgcatagttctccgctttgtccgtggtcaatttgaccctact
tcaaaggtaactgttggcgcatccttcttatctcaaacattagccttgcaaaattccacg
acggttaagtttgaaatatgggatacagctggacaagagaggtacgcctcactggctcct
ctttactaccgaggagctgctgttgcagttgtagtgtacgatataacaagtgaagaaaca
ttcagaaaagcacaatattgggtgaaggaacttcagaagcacgcgactcctggtattgtc
atggcattggttggtaacaaggctgacttgcaagaaaatagggttgtctcatctcaggat
gccatggagtatgcagagagaaatggcatgttcttcatggagacttcggcaaagacagat
aacaatatcaatgaactatttgaggatgtccaagtcagtacagctcaacacaatcataca
cctccaactccaagtgcactacattcctatttaaagttcgtccaccagagttcaataata
cacacatcaatatgctatcattcacattattgtttggctgacccatcaaaatatagaata
acgaagccaaaatttagccctcggggcttagtgcgacagacagatgagttttaccaacaa
tga

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