Zingiber officinale (ginger): 122022489
Help
Entry
122022489 CDS
T08725
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.2
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122022489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122022489
NCBI-ProteinID:
XP_042436444
LinkDB
All DBs
Position
9B:119548177..119550711
Genome browser
AA seq
597 aa
AA seq
DB search
MAALGVAACEKDAEMLALIEELTANAGRVQERVLAEILTQNSEAEYLKQKCDLGGATDRA
TFKAKVPVVTYEDVRPEIQRIADGDCSAILSGHPITEFLTSSGTSAGERKLMPTIQEELD
RKQLLYSLLMPVMNLYVDGLDKGMGLYFLFVKAESKTAGGLPARPVLTSYYKSHHFRHRH
FDPYNVYTSPTAAVLCPDAFQSMYAQMLCGLHHRLRVLRVGAVFASGLLRAIRFLQLHWR
QLAHDIATGTLTPRVSDPAVRAAVAEVLTRPDAALAEVIESECAGGDWAGIVARIWPNTK
YLDVIVTGAMAQYIPTLEFYSGGLPMACTMYASSECYFGLNLRPMCKPGEVSYTIMPNMA
YFEFLPLEDGLSSGSAATGAPLQLVDLARVEVGKQYELVITTYAGLCRYRVGDILQVTGF
YNSAPEFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRRWGASVVDYTSQAETRSIP
GHYVIYWELLVRSEGEDRWPPKEALEACCLEMEEAMNSVYRQSRAADGSIGPLEIRVVRG
GTFEELMDYAIGRGASINQYKVPRAVAFEPIIELLDSRVVGAYFSPACPKWTPQPRN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctcggagtcgctgcttgcgagaaggacgcggaaatgctggcgctcatcgag
gagctgacggcgaacgccgggcgggtgcaggagcgggtgctggccgagatcctgacgcag
aactccgaggcagagtacctgaagcagaaatgcgacctcggcggcgccacggacagagcc
accttcaaggccaaggttccggtggttacgtacgaagacgtccggcctgagatccaaagg
attgccgacggagactgctccgccatcctctccggccatcccatcaccgagttcctcacc
agctcggggacgtcggccggcgagaggaagttaatgcctaccatccaagaagagttggac
aggaagcagctcctttattctcttctcatgcctgttatgaacttgtatgtggatgggctg
gacaagggcatggggctgtatttcctgttcgtgaaggcggagagcaagacggccggcggg
ctcccggcccggccggtgctgaccagctactacaagagccatcacttccgccaccgccat
ttcgacccctacaacgtgtacacgagccccaccgccgccgtcctctgccccgacgccttc
cagagcatgtacgcccagatgctctgcggcctccaccaccgcctccgcgtcctccgcgtc
ggcgctgtcttcgcctccggcctcctccgcgcgatccgcttcctgcagctccactggcgc
cagctcgcgcatgacatcgccaccggcacgctcactccccgcgtgtccgacccggccgtc
cgcgccgccgtggcggaggtgctcacgcggcccgacgcggcgctggcggaggtcatcgag
tcggagtgcgccggaggagactgggccggcatcgtcgcccggatatggcccaacaccaag
tacctggacgtgatcgtgaccggcgccatggcgcagtacatccccacgctggagttctac
agcggcggcctcccgatggcctgcaccatgtacgcctcgtcggagtgctacttcgggctc
aacctccgaccgatgtgcaagcccggcgaggtctcctacaccatcatgccaaacatggcc
tacttcgagtttcttcccctggaagacggactctcctcgggctccgccgccaccggtgct
ccgctgcagctcgtcgacctggctcgagtggaggtgggcaagcagtacgagctggtcatc
actacgtacgccgggctctgccgctaccgagtcggcgacattctacaggtgacggggttc
tacaattcggcgcctgagttccgcttcgtgcggcggaagaacgtgctgctgagcatcgag
tcggacaagacggacgaggcggagctgcagcgggcggtggagcgggcgtcggcgctgctg
cggcgctggggcgcgagcgtggtggactacacgagccaagcggagacgcggtcgattccg
gggcactacgtgatctactgggagttgctggtgagatcggagggggaggaccggtggccg
ccgaaggaagcactggaggcgtgctgcttggagatggaggaggcgatgaactcggtttac
cggcagagccgggcggcggacggctcgatcgggccgctggagatacgcgtggtgcgcggc
ggcacgttcgaggaactgatggactacgccatagggcgcggcgcgtccatcaaccagtac
aaggtaccgcgcgccgtggcattcgagccgatcatcgagctgctggactccagggtcgtg
ggggcctacttcagccctgcctgccccaagtggaccccgcaacctcgcaattga
DBGET
integrated database retrieval system
