Zingiber officinale (ginger): 122022606
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Entry
122022606 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122022606
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122022606
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122022606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
UBA_ARIH2_N
Rcat_RNF216
ZapD
HYLS1_C
Motif
Other DBs
NCBI-GeneID:
122022606
NCBI-ProteinID:
XP_042436571
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Position
9B:103333538..103345922
Genome browser
AA seq
587 aa
AA seq
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MESEDDMHDANDLESFDDDFYSGDTGMGSDDGDDFDFVDNESDGSEDIAYHRQQQNYTIL
SEADIRLRQEEDISRVSTVLSIPRPDACILLRHYHWSVSRVNDEWFADEQHVRKIVGLLE
KPVKMQNHRELTCGICFENYTQDMMTSAACGHPFCGTCWRGYIGTSISDGPGCLMLRCPD
PLCSAAVGQDMMYLLASHEDKEKYSRYLLRSYIEDNRKTKWCPAPGCEFAVEYVIGCGTY
DVCCNCSYGFCWNCTEEAHRPVDCDTVAKWILKNSAESENMNWILANSKPCPKCKRPIEK
NQGCMHITCTPPCKFEFCWLCLGAWSEHGERTGGFYACNRYEAAKQEGAYDESERRREMA
KNSLERYTHYYERWATNQSSRQKALSDLHSMQNDKLEKLSDRQSQPESQLKFIIEAWLQI
VECRRVLKWTYAYGFYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQVYLDAETPM
KDFNDFRTKLAGLTSVTRNYFENLVRALETGLKDVGSSNSQATCSKTSSSKGLGSKGKGG
KSKATGNSSRLAGPSHSLDEDNFWSCDHCTYANHKSAKACQMCEHQR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaggacgacatgcatgacgccaatgacctggagtcgttcgacgacgatttc
tatagcggcgacaccgggatggggagtgatgacggcgacgatttcgatttcgtcgacaac
gagtcggatggctccgaggacatcgcctatcaccgccagcagcaaaactatactatatta
agtgaagctgatataagactgcgccaggaagaagacattagtagggtatcaactgtgctt
tcaataccaagaccagatgcatgcattcttctacgccattatcactggagtgttagtcga
gtgaacgacgagtggtttgcagatgaacaacacgttcgaaaaattgttggtctgttggaa
aagccagtcaaaatgcagaaccatagagaacttacttgtgggatttgttttgagaactac
actcaagacatgatgacttctgctgcttgtggtcatcctttttgtggtacttgctggaga
ggttatattggcacgtcgataagcgacggccctggatgcttaatgttgaggtgtccagat
ccattatgcagcgccgctgttggtcaagatatgatgtatctattggctagtcatgaagat
aaagagaagtattctcgctatcttcttagatcttatattgaagataatagaaagacaaaa
tggtgccctgcacctggttgtgaatttgcagttgagtatgtaattggctgtggaacctat
gatgtttgctgcaattgctcatatggcttctgttggaattgcaccgaggaagcccatcgg
ccagttgattgtgatacagtggcaaaatggatcctgaaaaacagtgctgaatctgagaat
atgaactggatattggcaaattcaaaaccctgtcctaagtgcaagcgtccaatcgagaaa
aaccaaggatgcatgcatattacatgcacacctccttgtaaattcgagttttgctggtta
tgtcttggtgcatggtcagaacatggggaaaggactggtggtttttacgcctgtaaccgt
tatgaagctgcaaagcaggaaggagcgtatgatgaatctgaaaggagaagagaaatggct
aaaaattctttggaaagatatactcattactatgaacgttgggcaactaatcagtcatca
aggcaaaaggcactgtcagatttacatagcatgcaaaatgataagcttgagaagctgagt
gaccggcaaagccaacctgagtcgcagctcaagtttatcatagaagcctggttacagata
gttgagtgtaggcgggtgttgaaatggacatatgcctatggtttttaccttcctgagcat
gaacatgcaaagcggcagttctttgaatatttgcaaggtgaggctgagtctggattggaa
cgtcttcatcaatgtgcagagaaggagctccaagtataccttgatgcagaaactccaatg
aaggatttcaatgatttccgcactaagttagctggcttgacgagtgtgactcgcaactac
tttgaaaacctagtccgagccctggagactggtttgaaggacgttggttcttccaatagc
caggccacgtgcagtaaaacttcaagctctaagggtttgggctcaaaaggaaagggcggc
aagtctaaagcaacaggaaacagctccagattagctggtcccagtcacagcttggatgag
gacaatttctggtcctgcgatcactgcacctatgccaaccacaaatccgccaaggcatgc
cagatgtgcgagcatcagcgataa
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