Zingiber officinale (ginger): 122022623
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Entry
122022623 CDS
T08725
Name
(RefSeq) proteasome subunit alpha type-1-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122022623
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122022623
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122022623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122022623
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
122022623
Peptidases and inhibitors [BR:
zof01002
]
Threonine peptidases
Family T1: proteasome family
122022623
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
122022623
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122022623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
122022623
NCBI-ProteinID:
XP_042436592
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Position
9B:4454567..4471340
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AA seq
262 aa
AA seq
DB search
MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGAAAVGLRSTSHVVLATVNKATSDLSSYQ
KKVFKVDDHIGVAISGLTADGRVLSRYLRNECINHAFVYESPLPVSRLVVRLADKAQVCT
QRSWKRPYGVGLLVAGLDETGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFESFN
NYSRDELIKDAVFAIKETLQGEKLTSAICTVAILGKDEAFHLIDQKIIQEIIDSIEIKED
APAEQAPEQDEAGSSGAAPMDI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaaccagtacgacactgatgtcactacctggagcccggcgggacggctgttc
caggttgagtacgccatggaggccgtcaagcagggcgctgccgcggtcggcctccgctcc
acctcgcacgtcgtcctagccaccgtcaacaaggccacctccgacctctcctcctatcag
aaaaaggtattcaaggttgacgatcacatcggcgttgccatctcgggtctcactgccgat
ggtcgcgttctttcccgctaccttcgcaacgaatgcatcaaccacgcatttgtctacgag
tctcctctgcctgtctcccgcctcgtcgtacgcctcgctgacaaggcgcaggtgtgcaca
cagcgatcctggaaaaggccatatggagttggtctgcttgttgctggattagatgaaacc
ggagctcacctctactacaactgccccagtggaaactacttcgagtaccaggcattcgca
attggttcccgctcacaagctgccaaaactttcttggaacgcaggttcgaatctttcaac
aactattctcgtgatgaactgatcaaagatgcagtttttgccatcaaggagacattacaa
ggagaaaagctgaccagcgccatctgcacagtagccattttgggaaaagatgaggccttt
catttgattgatcagaagataatccaagaaataattgattcaattgagatcaaagaagat
gctcctgctgaacaggctcctgagcaagacgaggcaggaagctccggagccgctccgatg
gatatctaa
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integrated database retrieval system
