Zingiber officinale (ginger): 122022649
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Entry
122022649 CDS
T08725
Name
(RefSeq) chaperone protein ClpB3, chloroplastic-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122022649
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
122022649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_18
Zeta_toxin
AAA_7
IstB_IS21
AAA_14
TniB
Mg_chelatase
RsgA_GTPase
AAA_24
ABC_tran
NACHT
AAA_25
NBD_SMAX1
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
122022649
NCBI-ProteinID:
XP_042436635
LinkDB
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Position
9B:100806782..100814530
Genome browser
AA seq
985 aa
AA seq
DB search
MTSVLCTTSASLRLLPPPSNACRSPFCSLLALSVSSGSRSSGERIRPLRLPETLGKKNDL
FLSKRVELSINVSRSVVVRCEARKDGRITQQEFTEMAWQAIVSSPEVAKGSKNQIVETEH
LMKSLLEQKNGLARRIFSKSGVDNTKLLEATDRFIQRQPKVLDESAGNMLGRDLEALIQR
AREYKRQFSDSFVSVEHLVLGFAEDPRFGKQLLKDFQISLNALKSALQAIRGQQHVIDQD
PEGKYEALEKYGKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKT
AISEGLAQRIVQGDVPQALMNRRLISLDMGALIAGAKYRGEFEDRLKAVLREVTESDGQI
ILFIDEIHTVVGAGATDGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRF
QQVYVGQPTVEDTISILRGLRERYELHHGVCISDSALVEAAILSDRYISGRFLPDKAIDL
VDEAAAKLKMEITSKPTALDEVNRSVLKLEMERLSLTNDTDKASKDRLNRLETELSMLKG
KQAELTEQWEHEKAVMTRIQSIKEEIDRVNVEIQQAEREYDLNRAAELKYGSLNSLQHQL
QGAEKDLIEYQSSGKSMLREEVTGNDIAEIVSKWTGIPVSKLQQSEREKLLYLEEEIHKR
VVGQDPAVKAVSEAIQRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALTSYMFNTEEAL
VRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNV
FLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNMNNDSESTDSAYEAIKQRVMDA
ARSIFRPEFMNRVDEYIVFQPLDREQITSIVKLQLERVQKRVADQKIRIQVSEAAVEFLG
NIGYDPNYGARPVKRVIQQNVENELAKGILRGDFKDEDNILLDTEVTNFSNGQLPQRRLV
FRKKDPVASSVKSPFEGQEAALPNR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtgttatgcacgacgagtgctagtctccgcctccttcctccgccatcgaat
gcctgccggagcccattctgcagcttactagccttatctgtctcctccgggagccggtcc
tccggcgagagaatcaggcccttgagattgccggaaaccctgggtaaaaagaacgatctc
ttcctgtcgaagagggtcgagctctcgataaacgtgtccaggtctgtcgtcgtcagatgt
gaagctcgcaaggatggaaggatcactcaacaagaattcactgagatggcttggcaagct
attgtttcatcaccagaagttgcaaaaggaagcaaaaatcagatagtggagacagaacat
ttaatgaaatcattgttggagcaaaaaaatgggcttgcacgtcgcatcttttccaagtca
ggagttgataatactaagctattagaagctactgatagattcatccagaggcagcctaag
gtcctggatgaatctgctggcaatatgttaggtcgagatcttgaagctttaattcagcga
gcccgagaatacaagaggcaatttagtgactcttttgtatctgtagaacatcttgtactt
ggttttgcagaagatccacgatttggaaaacaactcctcaaggattttcaaatttcattg
aatgctttaaaatctgctcttcaggctataaggggacagcaacatgttattgaccaagat
cctgaggggaaatatgaagcattagagaaatatggaaaagatttgactgctatggcacgt
gaagggaaacttgatccagtcatcggaagggatgatgaaattcgtaggtgcatacagatc
ttatcaaggagaacgaagaacaatcctgtattgataggcgaacctggtgtcggaaaaact
gctatatcagaagggcttgcacaaaggatagtacaaggagatgttccacaggctctgatg
aaccgcaggttgatttcccttgacatgggtgcactcattgctggggcgaagtatagggga
gaatttgaagatagactaaaagctgtactaagagaagtgacagaatctgatggtcagata
atccttttcattgacgagatccacactgtcgtaggggcaggtgccacagatggggccatg
gacgcaggtaaccttttgaaaccaatgcttggacgtggagaattgcgctgcattggtgcc
acaacacttgatgaatatcgcaagtatattgagaaagatccagctttggagcgtcgtttt
cagcaagtttatgttggtcagcctacagtagaagatacaatatcaatattacgtggattg
cgtgagagatacgagcttcatcatggtgtttgcatatctgatagtgctcttgtggaggct
gctattctttctgatcgctatataagtggccgctttttgccagacaaagcaattgacttg
gttgatgaggcagctgccaagctaaagatggaaataacatctaaaccaactgctcttgat
gaagttaatcggtctgtgttgaagttagaaatggaacggctctctttaactaatgatact
gataaagcttcaaaagatagattgaaccgccttgaaacagagctttcaatgttgaagggg
aagcaggctgaacttactgagcagtgggagcatgagaaagcagtgatgacaagaattcaa
tcaataaaagaggagattgatagggtgaatgtagaaatccagcaggcagagcgtgaatat
gatcttaaccgggcagctgaattaaaatatggaagccttaattccctacagcatcaactt
caaggtgcggaaaaggacctaattgagtatcaaagttctggaaaatcaatgcttagagaa
gaggtaactggaaatgacattgcagaaatagtcagcaaatggacaggtattcccgtatct
aagctgcaacaatctgagagagaaaagctactgtatctggaagaagaaattcacaagcga
gttgttggtcaagacccagccgtgaaagctgtctctgaggctatccaacggtctagagcc
ggtctctcagatcccaaccggccaattgctagtttcatgttcatgggacccaccggagtt
ggtaagacagaattggcaaaagcacttacttcttatatgtttaacacagaagaagcttta
gtgagaatagacatgagtgagtacatggagaagcacacagtttcaagattgattggagcc
ccaccaggctacgttggatatgaagagggggggcagttgactgagactgttcgccggagg
ccttatgcagtcatattgtttgatgagattgagaaggcacattctgacgtgttcaatgtt
ttccttcagattctggatgatggtagagtgactgattcacagggccggacagtgagtttc
acaaacacagttataattatgacatcaaatgttggttcccagtacatcttaaatatgaac
aatgactcagaatcgacggattctgcatatgaggctatcaagcagagagtgatggatgct
gctaggtccatctttcgtcctgaattcatgaatcgtgttgatgagtatattgttttccag
cccctcgatcgtgagcaaataaccagcattgtgaagttgcagttggaaagagtgcaaaag
cgagttgcagatcagaagatcagaattcaagtgtctgaagcagccgtggagtttctcgga
aacattgggtacgatcccaactatggcgctaggccagtgaagcgcgtcattcaacagaac
gtggagaatgaactggcaaagggtattctgaggggagactttaaggacgaggataatata
ttgttagacaccgaagtcacaaatttctccaatggtcagcttcctcaacgaaggttagtg
ttccggaagaaagacccagttgcttcttcagttaagtctccattcgagggtcaggaggcg
gccttgcctaatcgttga
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