Zingiber officinale (ginger): 122022757
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Entry
122022757 CDS
T08725
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122022757
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122022757
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
122022757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
122022757
NCBI-ProteinID:
XP_042436791
LinkDB
All DBs
Position
9B:complement(104846106..104856164)
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AA seq
904 aa
AA seq
DB search
MGEEDTNPRPRRDFPAFPFEPYPIQTEFMSFLYSFLDKGGGVAMLESPTGTGKTLSLICS
AMQWVVDHKEKKQLLKSMKTDAKLGEANDDGNCDEPQWMRDFDITDVEKKEVPRKRSEFG
VGDFDKKRSGAKSANVEKMGVQSLDDEEDFLLEEYISEDESTEGGFEKSKRKRDADSNWS
SSSDEEEDEEVTPKVYFCSRTHSQLSQFVDEFRRTRFALALKVTCLGSRKNLCINSDVLK
LRNPSRINERCLELQKNQKDAKLKVLDDKGKMRRSKGTSGCPMLRQQKLQKLFKNEVWST
DAMDIEDLVQLGSKIGTCPYYGARNMVPSSDIIVLPYQSLFLRSARESLSINLKKSIIII
DEAHNLADSLTNMYNAKISETQLKRILDVLEFYINKFRSCLGPGNRRYIQTLIVLIQSFL
QKLHEFLGTSSYRDEQGIKGSLADTSMTINDFLFSLNIDNLNLVKLHRYIKDSKIIHKIS
GYGTKLASLQSHNSICSDSQNNSEEGSILSGFQTLDNIIISLVHNDRDGRILLSRPKLSG
QKEEGYIKFMMLSGHTIFSEVLDQAYGVVLAGGTLQPIEETRVRLFPNLSRDEVHFYTCN
HIVPPESILPIVVSHGPSGVDFDFSYNSRNSLNMIGELGRLLCNLVAIVPEGFVVFFSSF
DYEGRVYDAWKASGVLSKISKKKIVYREPKSSNDVEHVLKKYKETIASCDTILKDTGING
AVLLAVVGGKISEGINLSDGMGRCILMVGLPYPSPDIELIERVQHIEGLGQAIPQRCNKP
FRNSSNDGHEAESGFGFLRRCKQRGKEYYENLCMKAVNQSIGRAIRHVNDYAAVLLVDSR
YACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQKRHTGGAEAQIG
LGYS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaggacacgaatccgcggccgcgtcgcgacttcccggccttccctttcgag
ccctatcccatccaaaccgagttcatgagctttctctacagcttcctcgacaaaggcggc
ggcgtcgctatgctcgagagccccaccggaaccggtaaaaccctaagcctcatttgtagc
gctatgcaatgggtcgtcgaccataaggaaaagaaacagctactgaagtctatgaagacg
gatgcgaaactgggcgaagccaacgatgatggaaattgcgacgagccccagtggatgagg
gactttgatatcacagatgtagaaaagaaagaggttcccagaaaaagaagtgagtttggg
gttggagattttgacaagaagcgctctggagcaaaatcagcaaatgtggaaaagatgggt
gtgcagtcattggacgacgaagaggattttttgttggaggaatatataagtgaagatgaa
agcacggagggcggctttgaaaaatcaaagaggaagagggatgctgattctaattggagc
agcagcagtgatgaggaggaagatgaggaagtgacacctaaggtatatttttgtagcagg
acacattcacagctgtcacagtttgtggatgaattcagaaggacgaggtttgctttggct
ctcaaagttacatgtttaggttcaaggaagaacttatgtattaattcagatgttttaaag
cttaggaacccaagccggattaatgagagatgcttggagctgcaaaagaatcagaaggat
gcgaaactcaaggttttggatgacaaggggaagatgcgacgttcaaagggcacatctggt
tgtccaatgttacggcaacagaagttgcaaaaactattcaagaatgaagtgtggagcaca
gatgcaatggacattgaggatcttgttcagctaggaagtaaaattggtacatgcccttac
tatggtgcccgcaacatggttccttcatctgacataattgtgcttccttaccaatcctta
tttttgaggtcggcacgtgagtcattaagtataaatttgaagaaaagtataataattatt
gatgaagcccacaacttagcagattctctaaccaacatgtacaatgcaaagatcagtgag
acacagttgaagcgaatactagacgtcctcgagttttatatcaacaaatttcgtagttgc
ctgggtccaggaaatcgccgttacatccagacccttatagtgttaatccagtcctttctt
caaaagttgcatgaattccttggcaccagttcttacagagatgagcaagggattaaaggg
tcacttgctgacacttccatgactataaatgatttcttattttcacttaacattgacaac
ctcaacttagtgaaactccacaggtacatcaaagacagcaaaataattcacaagataagt
ggctatggaactaaactggcaagcttgcaaagtcacaattccatttgttctgatagccag
aataatagtgaggaaggaagcatcttatctggctttcagacattagataatatcattatt
tcactggttcacaatgatagagatggaagaatattactctcaagaccaaaattatctggt
cagaaagaggaaggatacattaaatttatgatgctgtctggacacacaatcttttctgag
gtcttggatcaagcatatggtgttgttctggctgggggaacacttcaacccattgaagag
acaagagtacgcctcttccctaatttgtcacgggatgaagtacatttctacacatgcaac
catattgtccctccagagagcattttgcctattgtagtttcgcatggcccatcaggcgtt
gactttgatttcagttataattcaagaaattctttgaacatgattggagagctagggcgc
ctactttgcaacctcgtggcaattgttccagaaggatttgtagtgtttttctcttccttt
gactacgaaggacgggtttatgatgcatggaaagcttcgggagttctttcaaaaatttca
aagaaaaaaattgtgtacagggaacctaaaagtagtaatgacgttgagcatgtactcaag
aagtacaaggaaaccattgcaagttgtgatacaatattgaaagatactggaatcaatgga
gctgttctgttagcagtggttgggggaaagatctctgaaggtataaatcttagcgacggc
atgggtcgttgcattctaatggttggtcttccatatccaagtcctgatatagaactgatt
gaaagagtacaacatatagaaggactaggacaagccataccacagaggtgcaacaagccc
tttaggaattcatctaatgatggacacgaggctgagtctggttttggcttcttacgaagg
tgcaagcaaagaggaaaagagtattatgagaacttgtgcatgaaggccgtaaatcaatca
attggtcgagcgatcaggcacgtaaatgactatgctgcagttttgttagttgactcacgt
tatgcttgcagccaattaagccaaaacatgtcacacccgacgaacaaactaccactctgg
ataaagcagcggcttgtctcatctactcaaaactatggtgaagtccatcggttgctgcat
aagtttttccaatttaatcgacaaaagcggcatacaggaggagcagaagcacagatagga
ctcggatattcatga
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