KEGG   Zingiber officinale (ginger): 122022909
Entry
122022909         CDS       T08725                                 
Name
(RefSeq) flap endonuclease 1-like isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03030  DNA replication
zof03410  Base excision repair
zof03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122022909
   03410 Base excision repair
    122022909
   03450 Non-homologous end-joining
    122022909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zof03032]
    122022909
   03400 DNA repair and recombination proteins [BR:zof03400]
    122022909
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122022909
DNA replication proteins [BR:zof03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122022909
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122022909
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122022909
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122022909
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-GeneID: 122022909
NCBI-ProteinID: XP_042436953
LinkDB
Position
1A:complement(32668939..32672962)
AA seq 352 aa
MGIKGLTKLLADHAPKAMKEQKFESYFGRKIAIDASMSVYQFLIVVGRTGMNTLTNQTGE
VTRHLQGMFNRTIRLLEAGIEPVYVFDGQPPELKKQEFAKRYSKREDATNDLNTAIKISD
LEGIEKHSKRTVKVTKQHNEDCKRLLRLMGVPTIEAPCEAEAQCTALCKSDKVFAVASED
MDTLTFGAPRFLRHLMDPSSRKIPVMEFEVSKVLEELRLTMDQFIDLCILSGCDYCDSIK
GIGGQTALKLIRQHSCIEHILENINKERYKIPEEWPYQETRRLFKEPNVTMDVPELKWIA
PDEEGLLSFLVNENGFNSDRVAKVFVLFVVISSLLIVDYGSPYIKLFVNLSS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggggataaagggtttgacgaagctccttgcggaccacgctcccaaagctatgaaggaa
cagaagtttgagagttatttcggccggaagattgcaattgacgctagcatgagcgtgtac
cagttccttattgttgtcggaagaactggcatgaacactctcactaaccagactggtgaa
gttacacgtcatttgcaagggatgttcaatcgaactatcagattattagaagcaggtatc
gagccagtatatgtatttgacggtcaacctccagagctgaagaaacaagaatttgccaag
agatattcaaagagggaagatgcaactaacgatctgaacacagcaattaagattagtgat
ctagagggaattgaaaagcacagcaaaaggactgtcaaggtaaccaagcaacataatgaa
gattgtaaacgtctcttaagactgatgggtgtgcctactattgaggcaccgtgtgaagca
gaagctcaatgcacagctctttgcaaaagtgacaaggtgtttgcggttgcctcagaagac
atggatactttaacttttggggcaccgaggtttctccgtcatttaatggatcctagttcc
agaaaaatccctgtgatggaatttgaagtttcaaaggttcttgaagagctaagactcact
atggatcagttcattgatttgtgtattctctctggatgtgattattgtgatagcattaaa
ggcattggaggacaaactgctttgaagctcatccgtcagcatagttgcatagagcatatc
ttggagaacataaacaaagaaagatataaaattcctgaagagtggccgtatcaagaaact
cgacgtttgttcaaagaaccaaatgtgaccatggacgttccagaactaaagtggatagct
ccagatgaggagggtcttctgagctttctggtgaatgaaaatggattcaacagtgatcga
gttgctaaggtatttgtcctcttcgtagtgatttcttctttgctaatagttgattatgga
agtccctatattaaattgtttgttaatctcagctcctaa

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