Zingiber officinale (ginger): 122023294
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Entry
122023294 CDS
T08725
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122023294
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122023294
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GFIT
Motif
Pfam:
MutS_V
AAA_27
MutS_III
FAM186A-B_C
Motif
Other DBs
NCBI-GeneID:
122023294
NCBI-ProteinID:
XP_042437287
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Position
9B:112224838..112258627
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AA seq
609 aa
AA seq
DB search
MDKDGGERSSFVLGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYQNTNTLLHFYDPM
VIIVPPTKLAADGMVGVLEFVDKHYTSNKKVTLPRCCFDDTKGAVLVKSLAAKEPSALGL
GSYHKQYYLCLAAAAATIKWIEAEQGVIVVNHSLLVTFNGSFDHLNIDATSVQNLEIIDS
LHSESWSTGNKKRSLFQLLKTTKTIGGYTTIPFFGNQLKIFSDKKHFKHYFLGIGQRREW
EEIGGIDDLDGGLQLVLLEMVFNTADLEVFTRLIFFQQDESGLIDVIREDVSILTLLAEV
LCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPVAIDAGRHPILESVHNNFVPNNLFLSE
ASNMVIVMGPNMSGKSTYLQQVCLIIILAQIGCYIPARFASLRTVDRIFTRIGTGDNVEY
NSSTFMTEMKETAFLMQNVSSKSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKAYTVFA
THMEGISEMATIYPNVKILHFDVELKNNRLDFKFHLKDGPHHVPHYGLLLAGIAGLPSSV
VETARGITAKISEEDVKRMHVNCEKYRSVQMAYQVAQKLICLKYSNQSEDYIRQTLQNLQ
ESYKMDKLN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggacggaggggagcgatcaagcttcgtgttggggctgatcgagaatcgagca
aaggaggttggcgtggcagcttttgacttgagatcagcctccttacatctttctcagtac
attgaaacgagttgttcataccagaatactaatacacttcttcatttttatgatccgatg
gtcataattgtaccaccaaccaaactggcagcagatggtatggttggagtcctagaattt
gtagataaacattatacatcgaacaaaaaggtcacactgcctcgctgttgttttgatgat
actaagggagctgtgcttgttaaaagtttggcagcgaaggagccatctgctctgggttta
ggaagctaccataaacaatattatctatgcctagctgctgcagctgctaccataaagtgg
attgaagctgagcaaggtgtaatagttgtaaaccactcattactggttactttcaatggg
tcctttgatcacttgaatattgatgctaccagtgttcagaatttggaaattattgattca
ttgcattctgagtcgtggagcaccggcaacaagaagagaagcctatttcagttgctgaaa
acaacgaaaaccatcggcgggtatacaacaatccctttctttggcaaccagttaaaaatt
ttctctgacaagaaacattttaagcattactttcttggaattggtcaaaggagggagtgg
gaagagataggtggtattgatgaccttgatggtggcttgcaacttgtcctccttgagatg
gtgttcaatactgctgatttggaagtctttacaagattgattttctttcaacaggatgag
tcaggcttaattgatgtcataagggaagatgttagcatactgacgttacttgcagaggtt
ttatgccttctagatatgattgtgaattcatttgcccatacaatatccaccaaacctgtt
gatcgttatactagaccagaattcactgataacggtcctgtggctattgatgctggaagg
catcctattcttgagagcgtacacaataattttgttcctaacaatcttttcctctctgaa
gcatctaatatggtgattgtcatgggaccaaatatgagtggtaaaagcacttatcttcaa
caagtttgtcttatcatcatcctggctcaaattggttgctacatccctgctcgttttgca
tcactaaggacagttgatcgcattttcacacggatagggacgggagacaatgtcgagtac
aactcaagcacatttatgacagaaatgaaggagacagcttttctcatgcaaaatgtttct
tcaaagagcttgattgtcatggatgaacttggaagagctacatcttcctctgatggattt
gccattgcatggagctgttgcgagcatcttctttctcttaaagcttataccgtatttgct
acccatatggaaggcatctctgaaatggcaaccatctatcccaatgtaaagatactccac
tttgacgtggaattgaagaacaatcgcttagattttaagttccaccttaaggatggtcca
caccatgtgccacattatggtcttcttttggctggaattgctggtctgccaagctctgtg
gttgagacagcaaggggcatcacagcaaagatatctgaagaggatgtgaagaggatgcac
gtaaactgtgaaaaatatcgttcagttcaaatggcgtaccaagttgcccagaaactaatc
tgcttaaaatactccaaccaaagtgaggattacattcgacaaaccctacagaatcttcag
gagagctacaaaatggacaagttaaattga
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