Zingiber officinale (ginger): 122023330
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Entry
122023330 CDS
T08725
Name
(RefSeq) two pore calcium channel protein 1-like
KO
K16900
two pore calcium channel protein, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122023330
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
122023330
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Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
122023330
NCBI-ProteinID:
XP_042437318
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Position
9B:complement(117353938..117400397)
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AA seq
594 aa
AA seq
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METPLIAEEGRGFASGLTAAFSSRRRQQSGAHQRRRSFFSRDDALTLGDNYQKAAALVDL
ADDGVGLPEEILNDKRFEKAAKFYFIYIRLDLLWSLNLFAIVVLNFLEKPLWCQKNGSDV
CVERKYYFLGQLPYLNERQSLTYEGITLLILTIYNLFPLAYEGLHRYWENNLNKLKVVLL
LVLVCDMLVYSLCLSNVLIFLLPLRVAPYVRIIFVILSVRHLYGCMLTLAGMAGTYLNIL
ALSTLFLLFSSWLAYVIFEDTEQGKSMFTSYGTTLYQMFVLFTTSNNPDVWVPAYKSSRW
SCIFFVLYILLGVYFLTNLILAVVYDSFKNQLAKQVFQMDLMRKNILEKAFNLINVSGYL
NKQQCSHLFEELNEYRSLPKISKEDFELIFEELDDSGDFKINLEEFTDLCNAIALRFQRE
AAPSWFENYPTFYRSHPCEMLKAFVRSTTFANIVGFVLIINLVAVVIETTLDIQNSSAQT
FWQEIEFFFGWIYVLEMALKIFSFGFDAYWMDGQNQFDFVITWTIVVPEVFLKQLSDDDE
QEMVIEFIRCDFPDGCNHVGHGDKCNRSILLSVLEIFHKEPSTHYILFATRTRS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagacgccgttgatcgcggaagaagggaggggattcgcgtctggcctcacggctgcc
ttctctagtcgtagacgacagcagagcggcgcccaccagaggcgcaggtcgttcttctcg
agggacgatgccttaaccttgggagataactaccagaaggccgcggctcttgtggatctg
gcagatgacggtgttggtcttccagaggaaattttaaatgacaaaagatttgaaaaagct
gcaaagttctacttcatttacattcgcttggatttgctatggtcacttaatctttttgcc
atagttgtactcaactttcttgagaaaccactatggtgtcaaaagaatggcagcgatgtt
tgtgttgaaaggaagtattatttccttggacagctgccttatctaaatgaaaggcagtcc
cttacttatgaggggataacacttctcattctcacaatttataacttgtttccacttgct
tatgagggtcttcatcgttactgggagaacaatttgaacaagttaaaggtggtgcttttg
ttagttttagtttgtgatatgctggtatattctctctgtctctcgaatgtgctcattttt
ttattgcctttgagagttgcgccctatgttcgcataatctttgttattttatcagtcagg
cacttgtatggatgtatgctaacactagctggaatggctggcacataccttaatatcttg
gctctttccacgttgttcctcttgttttccagctggttagcttatgtaatatttgaggac
acagaacaggggaaatccatgtttacttcctatgggaccacattatatcagatgtttgta
ttgttcaccacatcaaacaatccagatgtatgggttcctgcctacaagagttcacgttgg
tcttgcatattttttgttctttatattctgctgggtgtctatttcctcacaaaccttatt
cttgctgttgtttatgatagcttcaagaaccagcttgcaaaacaagtttttcagatggac
ctaatgagaaaaaacatcttggaaaaggcattcaatcttataaatgtttctggctatttg
aacaagcaacaatgtagtcatctatttgaagaattgaatgaatatcggtctttgccaaaa
atttcaaaagaagattttgaattgatattcgaggagcttgatgacagtggtgatttcaag
attaatttggaagagttcactgatctttgcaatgctattgcattacggttccaaagagaa
gctgctccatcatggtttgagaactatccaacattttaccgatcacatccgtgcgaaatg
ttaaaggcatttgttcgcagcacaacatttgctaatattgtggggtttgtgcttataatc
aacctagttgctgttgtaattgaaacaacgcttgacatacagaacagttctgctcaaaca
ttttggcaagaaattgagtttttctttggatggatttacgtattggagatggctttgaaa
atcttttcctttggctttgacgcttattggatggatgggcaaaatcaatttgattttgtg
attacatggacaattgttgttccagaagtctttcttaaacagttgagtgatgacgatgaa
caagaaatggtcatcgagttcattcgctgtgattttcctgatggttgcaatcatgttggc
cacggagataagtgcaaccgatcgatccttctttctgttttggagatctttcataaggaa
ccttcaacccactacattctgtttgccactagaacaagatcatag
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