Zingiber officinale (ginger): 122023392
Help
Entry
122023392 CDS
T08725
Name
(RefSeq) indole-3-glycerol phosphate synthase-like isoform X1
KO
K01609
indole-3-glycerol phosphate synthase [EC:
4.1.1.48
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00400
Phenylalanine, tyrosine and tryptophan biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122023392
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.48 indole-3-glycerol-phosphate synthase
122023392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IGPS
Motif
Other DBs
NCBI-GeneID:
122023392
NCBI-ProteinID:
XP_042437414
LinkDB
All DBs
Position
1A:complement(38108627..38115655)
Genome browser
AA seq
392 aa
AA seq
DB search
MERLLAGSSLKVRAPISESPAVKCERNLSVRRGLMQLAVPGRRTPVPLRCVRWDEGNTAQ
QGILTYQSEEFMNAVEVRQWECGKSLNYIAAKQGITIRRHYRLGHGSNGTETEEDAPRNI
LQHIIWDKEVEVAQYKQAIPLVTLKKNIKNAPPARDFIGALRESYLRTGFPALIAEVKKA
SPSKGVLREDFDPVEIAKAYEKNGAACLSILTDKKYFQGSFENLEDVRKSGVQCPLLCKE
FVIDSWQIYYARSKGADAILLIAAVLPDVDIMYMTLVCRELGLTAIVEVHNEREMDRVLQ
IDGIQLIGINNRSLETFEVDISNTKKLLEGERRELVRKKGIKVVGESGLFVPQDISYVHD
AGVRAVLVGESLIKQADPGKAISVLFGKDISK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtctccttgccggctcttcgttgaaggttagggctccgatctccgaatcgccc
gccgtcaaatgcgagcgcaatctctctgttaggcgcgggttgatgcagctcgccgtcccg
ggccggcggacaccggttcctctccgctgcgtgaggtgggatgagggaaatactgctcaa
caaggtatattaacttatcagagtgaggaatttatgaatgctgttgaagttagacaatgg
gaatgtggaaagtcattaaattatatagctgcaaagcagggaatcacgattagaagacat
tatcgtcttggacatggttctaatggtacagaaactgaggaggatgctcctcgtaatatt
ttacaacatattatatgggacaaggaggtcgaagttgcgcagtataaacaagcaatacct
ttggtaacattgaagaaaaatatcaagaatgctccgcctgctagagattttattggagct
ttaagagaatcctatttgcggactggttttcctgcgcttatagctgaggttaaaaaggcc
tctccaagtaaaggtgtcttgcgtgaagattttgatcctgttgaaatagctaaggcttac
gagaaaaatggagcagcatgcctaagcattttgacagataaaaaatattttcagggaagt
ttcgaaaatcttgaagatgtacgtaaatctggagttcagtgccctcttctgtgcaaagaa
tttgtcattgattcctggcaaatttactatgctcgttccaaaggtgcagatgcgattctt
ttgattgctgcagtgctacctgatgttgatatcatgtacatgacgctggtctgcagggaa
cttggtttaacagcaattgttgaggtgcataatgaaagggaaatggatcgtgttttgcaa
atagatggaattcagcttattggaatcaataatcgtagccttgaaacatttgaggtggat
atttccaacacaaagaaactcttggagggagagcgccgtgaactagttcggaaaaaaggc
ataaaagttgttggagagagtgggttatttgttcctcaggacatttcatatgtacatgat
gccggggttagagcggtgttggtcggagaatctctcatcaagcaggctgatcctgggaag
gcaatatccgtactctttggaaaagatatatcaaaataa
DBGET
integrated database retrieval system
