Zingiber officinale (ginger): 122023425
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Entry
122023425 CDS
T08725
Name
(RefSeq) DNA repair protein RadA-like
KO
K04485
DNA repair protein RadA/Sms
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122023425
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
122023425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Lon_C
Zn_ribbon_LapB
NACHT
AAA_22
AAA
AAA_16
NTPase_1
nSTAND3
AAA_24
AAA_19
Isochorismatase
MCM
DUF6721
ABC_tran
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122023425
NCBI-ProteinID:
XP_042437458
LinkDB
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Position
9B:complement(50534862..50560531)
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AA seq
611 aa
AA seq
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MLKIQPASMQPFSTLLLRHELLLLPGSQASAGSRSLLSSSLPGGSRLLARPFDFPRCTLH
SGSPEWEEQSGAWPSSSEAEDMHKVSPYFDPLEGKIKSTPVADENESFRVGKPFTKKKGH
NVGPYAVVKRKSGKARISWVCDNCGEGFGQWWGSCPSCHTLASVKKFVESEVSTSRGSEI
SEAVVRSWFPQQLRTAAPLSLAEVSASRNQSEWRIPLSGHFGQEVSRVLGGGIVPGSLIL
IGGDPGIGKSTLLLQIASILAQGFNHNGSAPVVYVSGEESIEQIGNRADRMSITTKELFL
YSSTDIEDILDKIQTLFPRALVVDSIQTVYLKGVTGSAGNIMQVKECTSALLRFAKQTNI
PILFTGHVTKSGDIAGPRMLEHIVDGVFYMEGERYSSYRLLRSVKNRFGSTDELGVFEMT
EFGLQAVSNPSEIFLSEHFSDSEVLAGLAVAVILDGSRTFLVEIQALCVSDSSVRRHVNG
IQCSRADMIISVLMKQVGLKLQENAIFLNVVSGFQLNETAGDLAIAAAICSSFLEFPIPN
DVAFIGEVGLGGELRSVPRMDKRVIAVAKLGFKRCIVAKTTEKSIMALNLEMEILGCKNL
KEVINAVFVRV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaatccagcccgcctcgatgcaacctttcagcactcttctcctccgccacgag
ctcctcttgctccctggaagccaagcctctgcgggctcacgatctctcctctcctccagt
ctccctgggggttcaaggctcctcgctcgaccattcgacttccccaggtgcacgcttcat
tccggaagtccagagtgggaggaacaatctggagcttggccttcatccagtgaggctgag
gatatgcataaggtttccccctactttgatccactggagggaaagatcaagagcacgccg
gttgcagacgagaacgaaagcttcagggtcgggaagcctttcacgaagaagaaaggtcat
aatgtcggaccctacgcggttgtgaagaggaagtcggggaaggcgaggatttcttgggtc
tgcgataactgtggagagggatttggacagtggtggggaagttgcccatcctgccatact
ctggcctcggttaagaagtttgtggagtctgaggtgagtacgtcaagggggtctgagatt
tctgaagccgtagttaggtcgtggttccctcagcagttaagaacggcggcccccctgagc
ttggcagaagtcagcgctagcagaaaccagtctgaatggagaattccactctcggggcat
tttggacaggaggtttctagagtgcttggtggtggtattgtgccaggctccttaattcta
attggtggcgaccccggtattggcaagagtacactactattgcagattgcctctatttta
gctcaaggattcaatcacaatgggtctgctccagttgtatacgtatctggtgaggagagc
attgaacaaataggaaacagggcagacagaatgagtatcacaacaaaggaacttttcttg
tattcaagtaccgatattgaggacatcctggacaaaattcaaacattgttcccacgtgct
cttgttgttgattccattcaaactgtttatctgaaaggagttactggtagtgctggaaat
atcatgcaggttaaggagtgtacatctgcattgctccgatttgctaagcagactaatatc
cccattctttttactgggcatgtgacaaaatcaggagatattgctgggccccgaatgttg
gagcacatagtagatggtgttttctatatggagggtgagaggtactcatcttatcggcta
ttgcgctctgtgaagaaccgctttggttcaactgatgagcttggagtgtttgaaatgaca
gagtttggtttgcaagctgtctcaaatccaagtgaaatattcctaagcgaacacttctct
gactctgaagtattagctggtcttgcagtagcagttatccttgacggctcacgaactttc
ctggttgaaatccaggcattgtgtgtttctgattcttcagtaagaagacatgtcaatgga
atacaatgtagcagagctgatatgataatttcggttctaatgaagcaggttggcctgaag
cttcaagaaaatgccatctttctgaatgttgttagtggatttcagttgaacgagactgca
ggagacctggcaattgcggctgcaatttgtagcagtttcttggagttccctatccctaac
gatgttgctttcattggagaggttgggctgggcggtgaacttcgttctgttccaagaatg
gacaagagagtaatagctgttgctaaactgggtttcaagaggtgcatcgtagccaagaca
actgagaaatcgataatggcgttgaatctggagatggaaatattgggatgcaaaaacttg
aaagaagttatcaacgccgtgtttgttcgtgtctag
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