Zingiber officinale (ginger): 122023507
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Entry
122023507 CDS
T08725
Name
(RefSeq) calmodulin-binding transcription activator 3-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122023507
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
Others
122023507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
IQ
Ank_2
Ank
TIG
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
122023507
NCBI-ProteinID:
XP_042437564
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Position
9B:complement(6093629..6108380)
Genome browser
AA seq
1029 aa
AA seq
DB search
MAETRRFSLTPQLDMEQILLEAQHRWLRPAEICEILRNHQNFRIAPEPPNKPSSGSLFLF
DRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSIDVLHCYYAHGEENENFQRRSYWML
EEDLMHIVLVHYLEVKGHKPNFSRSRDSEETPPVKPIDSPVRSNSIISYSQMPSQATDAE
SHNSALTSEYEDTESADNYQTSSRYHTFTEMQQYGAGQLMSAQCLDPCVPDPSMDSHSSF
QVIDNKQCHSVQENMLDEIDLRLAFKGSKLQLDPTSWDEVLGHSARTLEMPSFQSSLRFT
EPVMGESDSRVELSTYGNPYAENLSNNQDVSALLGKAWQLSTVDSDSAVIPNINVDNETS
VDGNADGTPLLKQISLDFSSLEGEGLKKYDSFSKWMSKELGEVDESHTKSNSGAYWSAVG
SDNVAEDSSISNHEHLDAYIMPSLSQDQLFSIIDFSPNWAYAGSQTKVLITGTFLKNKDF
GKCKWSCMFGEVEVSAEVVGDGILRCHAPPYKSGRVPFYITCSNRLACSEVREFEFRDCD
SSCVENMNSGSNKSTEINLLIRLDKLLTLGPLDCQKDAEILAEKVELRSKISAMMEGVDE
WSTLLKMSKEKSFSVDNAKDQLLEALLREKLHAWLLHKVSEDIKGPNVWDEEGQGVLHLA
AALGYDWAIKPTVTAGVNINFRDTHGWTALHWAASCGRERTICALVAMGAGPGLLTDPTP
EFPSGRTPADLASANGHKGIAGFLAESSLTSHLSVLTIDPKASDSDFTSFIGDEDVSQPN
APEVVDGDTQAELSLKDSLSAVRNASQAAARIYQVFRMHSFHRNKFAEYEDDNTEISEEH
AISLLTVKSQNSGLYEHDAAIRIQNKFRGWKRRKEFLITRQRIVKIQAHVRGHQVRKRYK
KIVWTVGILEKVILRWRRKGSGLRGFRSEAALEGTSMQCQPAKEDEYDFLHVGRKQTEAR
LEKALARVKSMVQYPEARDQYRRLLNVVSEIQESKATQEHSLNESEDAADCDVMVDLDEL
CEDEAMIGA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgaggcggttctcattgactcctcaattggatatggagcaaatacttttg
gaagcacaacatcgctggttacgtccagctgaaatttgtgaaatactccggaaccatcag
aattttcgtattgcaccggaaccaccaaataagccatctagtggatctctttttcttttt
gatcgtaaagtactgagatattttaggaaggatggccataattggagaaagaaaaaagat
gggaagactgtgagagaagctcatgagaggctgaaagcaggaagtattgatgtgcttcat
tgctactatgctcatggagaagagaatgaaaatttccaaagacgaagttattggatgctg
gaagaggacttaatgcatattgttctggttcactatcttgaagtcaagggtcataaacca
aacttcagccggtctagagattctgaagaaactcccccagttaagcctatagatagtcct
gttcgttcaaattctatcataagttacagtcagatgccttcccaagcaactgatgctgag
agccacaacagtgcgcttacatcagaatatgaggatactgaatcagcagataattatcaa
acaagttccagataccacactttcactgagatgcagcagtatggtgctggacaactgatg
agcgctcaatgcttggacccttgcgttccagatccttccatggatagtcatagcagtttt
caggtaatagataataaacaatgtcattctgttcaagagaatatgttggatgaaatagac
cttcgattagcattcaaggggtctaaattacagcttgatccaacatcatgggatgaagtc
ttggggcacagtgccagaacattagagatgccaagttttcagtcatcacttcgttttaca
gagcctgtaatgggggaaagcgacagtagagttgaactttcaacatatgggaatccatat
gctgaaaatcttagcaacaaccaagatgtatcggctttgttgggtaaagcatggcagctt
tcaactgttgactcagattcagctgttataccaaacattaatgtggataatgagacatct
gtggatggaaatgctgacggcactccccttttgaagcaaatatcattggacttctctagt
ttagaaggagaaggcctaaaaaagtatgatagcttctcaaaatggatgagcaaagaacta
ggagaagttgatgaatcacatacaaaatccaattctggagcctactggagtgctgttggc
agtgacaatgtagctgaagattctagtatttcaaatcatgagcatttagatgcatatata
atgccctcactttcacaagatcagcttttcagtataattgatttctctccaaattgggca
tatgctggctctcaaactaaggttttaattactgggacattcttgaagaataaagatttt
ggaaaatgtaaatggtcatgcatgtttggggaagtggaagtttcagctgaggttgttgga
gatggaattcttcgttgccatgctccgccatacaaatctgggagggttcctttttatatt
acctgttccaacaggttggcctgtagtgaagtgagggaatttgaatttcgtgactgtgat
tcctcctgtgtggagaatatgaattctggaagtaataaatcaactgaaataaatcttctt
atccgtcttgataagctgctgactctaggacccctagattgccaaaaggatgcagagatc
cttgcagagaaagttgaattaagaagtaagataagtgcaatgatggaaggtgttgatgag
tggtcaactctgcttaagatgagtaaagaaaagagcttctctgttgataatgcaaaggat
caattacttgaggctttattgcgtgaaaaattgcatgcttggcttctacacaaagtgtct
gaagatatcaaaggcccaaatgtgtgggatgaggaagggcaaggcgtcttgcatttagca
gctgcccttggttatgattgggctataaaaccaacagtgactgccggtgtaaatatcaat
ttcagagatacacatgggtggactgcccttcactgggcagcatcttgtggcagggagcgt
acaatttgtgcccttgttgcaatgggtgcaggacctggtttgttgacagatcctacccct
gagtttccttctggaagaacacctgcagatttagcatctgcaaatggccacaaaggcatt
gctggatttcttgcagagtcatctttaactagccatctttctgttctcactatagaccca
aaggctagtgattcagactttactagcttcataggtgatgaagatgtttctcaacccaat
gcccctgaggttgttgatggagacacccaggctgaactgtcattgaaggactcactgagt
gctgttcgcaatgcttctcaggctgcagctcgcatctatcaagtttttagaatgcattca
tttcacaggaataaatttgctgagtatgaagatgacaacactgaaatatcagaggagcat
gcaatttccctcctaacagtcaagtcacagaactcaggattgtatgagcatgatgctgcc
attcgtatacaaaacaagttcagaggatggaaaaggagaaaagagttcttaattactagg
caacggatagtcaagatccaggctcatgtacgcggtcatcaagtgaggaaacggtacaaa
aaaattgtgtggacagtaggaattttagagaaagtcatactgagatggaggcgtaaagga
agtgggctacgtggctttcgatctgaagccgctttggagggcactagcatgcaatgccaa
ccagctaaagaggatgagtatgatttcctgcatgtaggtagaaaacagacggaggctagg
ctggagaaggcacttgcgagggttaagtccatggtccaatatccagaagctagagatcag
taccgaaggcttttaaatgtggtttcggaaatccaagagtccaaggctacacaagaacac
agtttgaatgaatcagaggatgctgctgactgtgatgtgatggttgatctagatgagcta
tgtgaagatgaagcaatgattggtgcttaa
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