Zingiber officinale (ginger): 122023559
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Entry
122023559 CDS
T08725
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122023559
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122023559
Peptidases and inhibitors [BR:
zof01002
]
Serine peptidases
Family S54: Rhomboid family
122023559
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EMC6_arch
DER1
Motif
Other DBs
NCBI-GeneID:
122023559
NCBI-ProteinID:
XP_042437654
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All DBs
Position
9B:complement(46097705..46112882)
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AA seq
334 aa
AA seq
DB search
MFSSDVERGAADGKNMGAAANGRHFGPNYTAPFYYDAGASEERGWTPWVVPLVVVGNIAM
FVVTMYVNNCPVRRSPYGSCVAGSLHRFSFQPLRENPLFGPSSSTLQKMGALEWERVVHQ
HQGWRLVTCMWLHAGLIHLIANMLSLVFIGIRLEQQFGFLRIGAIYLLSGFGGSILSSLF
MRNSISVGASGALFGLLGAMLSELITNWTIYTNKAAALFTLLIIIVINLAVGILPHVDNF
AHIGGFLVGFFLGFILLLQPQFGWVARHNLPREGRVKSKYLAYQYILGIVSLILLVVGFI
VGLIMLFRGVNGNDHCHWCHYLSCVPTSRWSCSN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctccgacgtcgagaggggagcagccgacgggaagaacatgggggctgctgcc
aacggtcgccacttcggtccgaactacactgcgccgttttactacgacgccggcgcctcg
gaggagcggggctggacgccctgggttgtgccgctcgtcgtggtgggcaatatcgccatg
tttgttgtcaccatgtacgtcaacaactgccccgtccgtagatccccctacggctcctgc
gtcgccggatccctccaccgcttctccttccagcccctgcgtgagaaccccctcttcggg
ccttcgtcatccacattgcagaagatgggtgctttagaatgggaaagggtggtacatcaa
catcaaggatggaggcttgtgacttgtatgtggttgcatgctggtcttatacatctgatc
gccaatatgctgagcttggttttcattggcattcgccttgaacagcaatttggattcttg
cgaattggggcaatatacctactttctggatttggaggtagtattctgtcatctcttttc
atgaggaatagtatttctgttggtgcatctggtgctctgtttggacttcttggggcaatg
ctgtcagaattaattactaactggaccatttacacaaacaaggcagcagccctattcact
ctactgatcatcattgttatcaatttggctgtgggtatcctaccgcatgttgataacttt
gcccacattggaggttttttggtggggttttttctgggttttatattgctgctccagcct
caatttggttgggtggcacgccacaatctacctcgtgaaggcagagttaaatcgaagtat
ttggcctaccagtacatattagggattgtttcactgattttgctagtggttggatttatc
gttggtttgataatgctttttcgaggggtaaatgggaacgatcattgccattggtgccat
tacctgagctgtgtaccgacatctcgatggagctgttcaaactaa
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