Zingiber officinale (ginger): 122023591
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Entry
122023591 CDS
T08725
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122023591
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
122023591
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
122023591
NCBI-ProteinID:
XP_042437717
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Position
1A:41133455..41139135
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AA seq
644 aa
AA seq
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MGVELQGYDFPVGVVEDGYLSDSEAFASVINVINGVRMAPSLVPQSNKEQYDYLVTVVNP
GKRIGQDDEALMATALKALSRAVFRLDAVYHGSLLNNIFMSSIWDYGLDARNALLELITT
LATVPDKFLDNCLYTLLHNLRPPSRLKAPFNQSKRWLMRKEEVRREVYLALNCINTLVPL
APARLKILIEKCMPRFTEDKYVLMTYVEGILGLERNEIGKFLGSTVLARVVDLLIDLDVN
IPWEDILQEEPNKGIFAIELGECNEDDEYTTIPNMDTLGLVKNTFADKLDGLMVVACEHL
KSCSESGHLLEVFERLSEIFQRAMLKLHKSKFTQFLMFYACSLDPDTCGLKFAIMLTDIF
ISKDEDPDSRMKAIAYLASYLARAKFIPSSLVASILKRLVDWCFEYCQLQDSWVNKISPQ
ADRVFYSGCQAVMYILCFRLRSICDVPQLKQLLFHLPVDSILHHPVLDPLKVCLPLIVQE
FLRQAQTARLFKKPMAHSYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFE
FWDMVKTTYSDYDSSEGEDSEGEDELKDLGPSNFPKDNDDEDDLDLKIDKMSITPNPSFL
HQIATNFDQSSQMPARIRPSQSPPSPRHGFLYTKKEERLDDQKI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaactgcaagggtatgactttcctgttggtgtggtggaggacggctacctc
agtgattcggaggcttttgcttctgttataaacgttatcaatggtgttcggatggctcca
tctttagtacctcagagcaataaggagcagtatgattaccttgtaactgtggtgaaccca
ggcaagagaattggtcaagatgatgaagctttgatggcgacagcattgaaggcactatca
agagctgttttcaggctagatgctgtataccatggttccctactaaataatatttttatg
tcctccatttgggattatgggttggatgcgagaaatgcattgcttgaattgatcactaca
ttggccactgtacctgacaaatttcttgacaattgtttgtatacacttttgcacaacctt
cggccacccagtcggttaaaggcaccctttaatcaatcaaaaagatggctcatgagaaag
gaagaagttcgtcgtgaagtttatttggcattaaattgtattaatactttagtacctctt
gctccagcacgactgaagattttaattgaaaaatgtatgcctagattcactgaagacaaa
tatgttttgatgacatatgttgaaggcatacttggactagaaagaaatgaaattggaaaa
ttccttggaagcacagtgttggctagagtggtggatttgttgatagacttggatgtaaac
ataccctgggaagacattcttcaggaagaaccaaacaaaggcatatttgcaattgaactt
ggagagtgtaatgaagatgatgaatatactactatacctaatatggacactctgggttta
gtgaagaacacttttgctgacaaattggatggtttgatggtggtggcatgtgaacatctt
aaatcatgttcagagagtggccatttattagaggtgtttgaaagactgtcagaaatcttc
cagagggccatgttaaaacttcataagtcaaagtttactcagttcctgatgttttatgcc
tgttcattggatcctgacacgtgtggtttgaaatttgctataatgcttacagatattttt
atttcgaaggatgaggatccggattccagaatgaaggctattgcatatcttgcaagttat
ttggcccgggctaagtttattccttcttcccttgttgcaagcatacttaagagattggta
gattggtgttttgagtattgtcaattgcaagatagttgggtaaacaaaatcagtcctcaa
gctgaccgagtattttattctggatgtcaggctgtgatgtacatcctttgctttcgattg
cgatccatctgcgatgtccctcaactgaagcagctacttttccacctgcctgttgattca
attttgcatcatcctgtcttggatcctcttaaggtgtgtttgcccttgatcgttcaggag
ttcctgaggcaggcacagactgcccggttgtttaagaaacccatggctcattcttacgac
aactcgttggaatctgagttctcaaaggcttttggaggaattcagcgcttggacatgttc
ttcccatttgatccatatcttctaaaagaatctgatagattcatgcgacccaatttcgag
ttctgggacatggtgaagacaacctacagtgactacgacagcagcgagggagaggacagt
gagggagaggacgaactcaaggaccttggtccttccaatttccccaaggataacgacgac
gaagatgatctcgacctaaaaatcgacaagatgtcaattaccccgaaccccagcttcctt
caccaaatagccaccaacttcgatcagtcttcacagatgccggcgagaataaggccatct
cagagtcctccatctcctcgtcatgggtttttatatacaaagaaagaagaaaggttagac
gatcaaaagatttag
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