KEGG   Zingiber officinale (ginger): 122023596
Entry
122023596         CDS       T08725                                 
Name
(RefSeq) DNA-repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122023596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122023596
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122023596
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 Med24_N BRCT_3
Other DBs
NCBI-GeneID: 122023596
NCBI-ProteinID: XP_042437720
LinkDB
Position
9B:22700535..22725671
AA seq 452 aa
MLILSYPFSSLITEIRQCTEILLSDCLLCVFLRSSALIAFNYCYLRTTKLVVLKVEQTVF
AWSAICKDFCIMSNARSYGDDDHAVKEKRILPPGVSSRDAKDKSYGKALVDASIGELNNV
KRSNNSDPPETSQNRKDFSNLLEGVVFALSGFVNPERAAIRSQALEMGAKYRPDWTSDCT
ILVCAFSNTPKFRQVKSDGATIVSKEWIFESYIQKRLVDIEPYLMHVGKPWRNNSKQFDT
NQDQNVAQHEESLTQSRKSDMKFSRSKRHVETTDVDGQFSPSKIKKWAIDDLHKTMSWLE
SQDEKPDESEIKSIAAEGIITCLQDAIDSLSQGHDVRLASEQWKFVPRVVKELVELEEKS
SKKPPTSKKVLHELALKCKEIYEGELLLVDNTKIKQQKIFHAVEGEPADDPGADSDDTIE
MTEEEIELAYRQFSESCECPSNRNLSSNSEEG
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgctaatcttatcatatcctttttcttctttaattacagagattaggcaatgcactgag
atactattaagcgactgcttgctgtgtgtcttcctcagaagttctgcattgattgcattt
aattattgttatttaaggaccactaagttagttgttctcaaagttgaacaaacagttttt
gcttggtctgcaatctgcaaagatttttgcatcatgtccaatgcacgctcatacggcgat
gatgatcatgctgtgaaagaaaagagaatccttcctcctggggtcagttctagagacgca
aaagacaagtcatatggaaaagctttggttgatgcttctataggggaattaaataatgta
aaaagaagcaacaattctgacccacctgaaacgtctcaaaataggaaggatttttcaaac
ttgctggaaggtgtagtattcgcactgtctgggtttgttaaccctgaaagggctgcaata
cgatctcaggcactagagatgggggcaaaataccgaccagattggacctcagattgtaca
attctagtgtgtgcattttcgaatactcctaaatttagacaagtcaaatctgatggtgct
acgatcgtgtcaaaggaatggatatttgagtcctacatccagaaaaggcttgttgacatt
gaaccttaccttatgcatgttgggaaaccatggcgaaacaatagcaagcagtttgatacc
aatcaagatcagaacgttgcccaacatgaagaatctctaacacaatctcggaaatcagat
atgaagtttagcagatccaaaagacatgtggaaactactgatgttgatggtcaattttct
ccttccaagataaaaaaatgggcaatagatgatttgcataaaacaatgtcatggttggag
agtcaagatgaaaaaccagatgagagtgaaatcaaaagtatagctgcagaaggaattatt
acttgtcttcaagatgcaattgattctctcagtcaaggtcatgatgttcggcttgctagt
gagcaatggaagttcgttcctcgtgttgttaaagagctggtggaacttgaggagaaaagc
agtaaaaaaccaccaacttcgaagaaagtgctgcatgagttagctttaaagtgcaaggag
atttatgaaggcgagcttttgcttgtagataacactaaaataaaacaacagaagattttt
catgctgtggagggagaacctgcggatgatcctggggcggacagtgatgacacaattgaa
atgacagaagaagaaattgagcttgcatacagacaattttctgagagctgtgaatgtcct
agcaataggaacttaagcagcaactcagaagaaggatga

DBGET integrated database retrieval system