Zingiber officinale (ginger): 122023803
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Entry
122023803 CDS
T08725
Name
(RefSeq) putative disease resistance protein RGA1
Organism
zof
Zingiber officinale (ginger)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
NB-ARC
LRR_14
WH_DRP
LRR_4
Rx_N
LRR_RPS2
LRR_At1g61320_AtMIF1
AAA_16
LRR_Zer-1
LRR_13
LRR_8
NACHT
nSTAND3
AAA_14
ATPase_2
Motif
Other DBs
NCBI-GeneID:
122023803
NCBI-ProteinID:
XP_042438090
LinkDB
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Position
9B:118329881..118336269
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AA seq
1458 aa
AA seq
DB search
MIGRFALTAFGWLAESIVGVLVGKAVDRAVQQFGEQHGVEDDLKKLKDSLANAKLKISTI
ENLWLKDEFLQQRVKDLLIDLKNAAYDADDLLDEFQYRILKQQIEQQGDEAGKRASSSSY
SAPPPSKRTKTSIASCTSGLFRKGDDDDDNNNVQKIRKIKGSLDDYSAALEEIYSSLGAE
DDRGKQQLVSSASRQTSSFSTEPQLFGRDKELQELKDLLFKPAVASEFGQSGVSVLSIYG
MGGIGKTTLAQEVFNDSSVKEYFKLRIWVCVSENFCTDRLTREIIECATTEKCDLTNLDT
LQKIVNEKITPERFLLVLDDVWNEDRHKWESLCAPLRSGKPGSKILVTTRSRKIADMVSD
ADAIHLQGLDVESFWDFFKKCAFGCSHSGAHHPHMEAMAKKMTCKLKGLPLAAKTLGGLL
SVKLDEQYWESILDSEIWQLPQEENGIMPVLQLSYQHLPPHLKQCFAFCSLFPKGYKFSE
SDLIGIWIAEGFIVPRGSTRMEELGSNYFHELVNRSFIQESKYGEWIMHDLIHDLAELIS
AGESYRIEKGKSHDIPSTIRHLSIYTDKEGMQTILTEFSHWNKLRTMMLTVERFPREDFN
FDCGVLEKLKNIHVLVLNNCSLRELPDGIDKLIHLRYLDLSYNEGIQRLPELLCDLYNLQ
TLILGFCDNLKSLPHGMMKLINLRKLYGVDRLISGITEIGKLTSLQNLYSFKVTKDNGHK
LVELNGLKQLRGFLCITNLENVKNKDEANIASLKSKEYLDVLELEWTSLQESDSDVNLHI
SEQVLEGLQPHHNLQRLIIKGYNGARPPNWLHKQVYSRLGSLHLENCKRWNDLSAIGQLS
QLKFLYLVRTPIQTKNIHKLFNPKVCKFFSQLEELVLEGITMLEDLPNLGQLPCLTFIRI
QSLPGVKKIGDKFFAMTEEGSCFPRLRTLRFIEMPAWEELYGSDDRNLFPCLEDLYISNC
QKLQMLPPLPPSIQQLKLNNVGLVDCPRFWKAFDEGSSTTNSASLTYLSIQNCPNLTSLD
QGLLPHHLFPCLVNLDISNCQKLQMLPPLPPSIQQLKLNNVGLVDCPRFWKAFDEGSSTT
NSASLTYLSIQNCPNLTSLDQGLLPHHLFPCLVNLDISNCQKLQMLPPLPPSIQQLKLNN
VGLVDCPRFWKAFDEGSSTTNSASLTYLSIQNCPNLTSLEPVLLPHHHHLQKIHLKKCEQ
LSWVPVKRLKELTSLWSLSLKDCPKLMGMSTPDEYIDFQLPPSITELCLSDCENLFKSLP
GCLHNLTSLTSLSVSKCPNLVSLPVEPSLRLTRLEIQNCNELRSVEGLPIKNLEVLKIKG
CPKLLLPQTEKLPLLKLEIDDTAFMKQPLIKNSLSSVRGLTISSSREAVMFEGEDQESLQ
SLTSLYSFCFSDCKNLQTLPAKLYTLKSLRFLQIHNCPQIQSLPEKGLPPSLAHINFEGC
DQALEQQLVRHLAEINKS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgattgggaggttcgcgctgacagcctttggatggctcgcggagagcatcgtgggtgtc
ttggtcgggaaggccgtcgatcgtgctgttcaacagttcggtgagcagcatggagttgaa
gatgacctcaagaagctgaaggattctctcgccaacgccaagctgaagatcagcaccatc
gagaacttgtggctgaaagatgagttcctgcagcagagagtgaaggacttgctgatagac
ctcaagaatgctgcttatgatgctgatgacttactggatgaattccaatacaggattctg
aagcagcagatcgagcagcaaggagatgaggctggtaaacgagcatcgtcttcctcctac
tctgctccccctccaagcaaaaggacaaaaacttcaattgcaagttgtaccagtggcctt
ttcagaaaaggagatgatgatgatgataataataatgtgcagaaaatcaggaaaataaag
gggagtttagatgactactcagctgctctcgaggaaatttacagttcgctaggcgcagaa
gatgatagaggaaagcaacaattagtgtcctcagcgagccggcaaacgagctccttttcg
actgaacctcaattgtttggcagagacaaagagctgcaagaactcaaggatttgttgttc
aaaccagcagttgcatctgaatttggccaaagtggagtttctgttttatctatttatggt
atgggagggattgggaagaccactctggctcaggaggttttcaatgacagtagtgtaaaa
gaatactttaagctcagaatttgggtctgtgtttctgaaaatttctgcacagataggctg
accagagagattatagagtgtgcaaccacggagaagtgtgatctcacgaatttagatact
cttcaaaagattgtcaatgagaagatcacgccagagagatttcttcttgtattggacgat
gtgtggaacgaggacagacacaaatgggagagcctctgtgcgccattgaggtctggaaag
cccggtagcaagatattggtaacaactcgctctaggaagattgctgatatggtcagtgat
gcggatgccattcatctgcaaggtcttgacgtggagagcttctgggattttttcaagaaa
tgtgcatttggttgttcacatagtggtgctcatcatcctcatatggaagccatggcgaag
aagatgacttgcaagctcaagggattgccgcttgcagcaaagactctaggagggttgttg
agcgtgaaattggatgagcaatactgggaaagcattttagatagtgaaatatggcagctt
ccccaagaagaaaatgggattatgccagtgctacaactgagctatcaacatctccctcct
catcttaagcaatgctttgcattttgctccttgtttcctaaaggttacaagttttctgaa
tctgacttgatcggtatttggatagcagaaggatttatagtgcctcgaggaagtaccaga
atggaggagctaggaagcaactattttcatgagttagttaacaggtcattcattcaagag
tcaaagtatggagaatggataatgcatgacctcatacatgatcttgcagaactcatatct
gcgggcgagtcttacaggattgaaaaaggcaagtcccatgacattcctagcaccattcgt
catctttcaatatacacagataaagaaggtatgcaaacaattttaacagaattctctcat
tggaataaattacgaacaatgatgttgacagtagaaagattccctcgggaagattttaat
tttgattgtggcgttttggaaaaattaaaaaatattcatgtgcttgtcttgaataattgt
tctttgagagaattacccgatggtattgacaagttgatacatctccgctatcttgactta
tcctataatgaaggcattcaaaggttacctgagttattatgcgacttgtacaatctgcag
acattgatattaggattttgtgataacttaaaaagtctcccgcatggcatgatgaagttg
atcaacttgaggaaactttatggagtggataggcttatttccgggataacagagatcggg
aagcttacttctcttcaaaatttgtattctttcaaagtgacaaaggataatggacacaaa
cttgttgaattaaacggtttgaaacaactccgggggtttctatgtataacaaatcttgag
aatgtgaagaacaaggatgaagcaaatattgctagtttgaagagtaaagaatacctcgat
gtgttggagctagaatggacatctctgcaagaatctgattcagacgttaatttgcacatc
tcagaacaggtgcttgaaggtctccagccgcatcacaacctacaaaggctgataatcaaa
ggatataatggagctagacctcccaattggctacacaaacaagtatattctagattggga
tctctccatcttgaaaattgtaaaaggtggaacgatctgtcagctattgggcaattatca
caattaaagttcctctaccttgtgagaactccaatccagaccaaaaatatacacaaattg
ttcaatccaaaagtctgcaagttcttctcccaactagaagagttggtactagagggtatt
accatgttggaggatctcccaaatcttggacaacttccatgtctgacgttcattcgcatt
cagagtttgccgggagtgaagaagataggtgataaattctttgccatgacagaggaaggc
agttgctttcctagactacgtactctccgattcatagaaatgccagcatgggaagagctc
tatggatccgatgatagaaatctatttccctgcttggaggatctttatatttcaaattgc
caaaagctgcagatgttacctccccttcctccttcaatacaacaattaaaattaaataac
gttgggctggtagattgtccaagattctggaaagcatttgatgaaggtagcagtacaact
aattctgcatctcttacgtatttgtccattcagaattgtccaaatttgacaagtctagat
caaggattactaccacaccatctatttccctgcttggtgaatcttgatatttcaaattgc
caaaagctgcagatgttacctccccttcctccttcaatacaacaattaaaattaaataac
gttgggctggtagattgtccaagattctggaaagcatttgatgaaggtagcagtacaact
aattctgcatctcttacgtatttgtccattcagaattgtccaaatttgacaagtctagat
caaggattactaccacaccatctatttccctgcttggtgaatcttgatatttcaaattgc
caaaagctgcagatgttacctccccttcctccttcaatacaacaattaaaattaaataac
gttgggctggtagattgtccaagattctggaaagcatttgatgaaggtagcagtacaact
aattctgcatctcttacgtatttgtccattcagaattgtccaaatttgacaagtctagaa
ccagtgttactaccacaccatcaccatctacagaagattcatctaaaaaaatgtgaacaa
ttgtcgtgggtgccagtcaaaaggttgaaagaactcacctctttatggtcattgtcatta
aaagattgcccgaagctcatgggcatgagcacaccagatgagtacattgatttccaactc
ccgccatcaattacagaactatgtttgtctgattgtgaaaatcttttcaaatcactgcct
ggctgcttgcataaccttacctcgttgacttccttgtcggtaagcaaatgtcccaatcta
gtttctttgccagtagaaccatcgcttagattgactcgtctagaaatccagaattgcaat
gagttgagatcagtagaagggctaccaataaaaaatctggaggtcttgaagattaaagga
tgccctaagcttctacttccacaaacagagaaattgccattgttgaagttagagattgat
gacacagcgtttatgaaacaacctctcataaaaaattcattatcatctgtccgtggactt
acaatctcatcctctcgtgaagcggtgatgtttgagggggaagatcaggagtcactgcaa
agcttgacatctctctattccttttgtttctctgattgcaagaatctacaaaccctgcca
gcaaaattgtacacgcttaagtcccttcggtttttgcagatacataattgcccacaaatt
cagtctctgccagagaaggggttacctccttcccttgcacatataaattttgaaggttgt
gatcaagcattggagcagcagttggtaagacacttggcagagattaataagtcatga
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integrated database retrieval system
