Zingiber officinale (ginger): 122023932
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Entry
122023932 CDS
T08725
Name
(RefSeq) acyl-CoA-binding domain-containing protein 5-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122023932
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122023932
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
122023932
NCBI-ProteinID:
XP_042438306
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Position
9B:199815..203358
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AA seq
683 aa
AA seq
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MPHLTCFISDFDPCRPFFLTSSLPAYQWPVLCLSSTQLSGEEESEGGEMGSRGVEAVKRR
KAMWLYPKVPGFNPPERWGHSVCFFDGAVYVFGGCCGGMHFSDVLALNLETMSWSSLVTT
GQKPGSRDSHSVALAGHKMVVFGGTNGTKKVNDLHILDLRTKEWSKPNCVGTQPSPRESH
TATVIGDEKLLIFGGSGEGEANYLNDVFILDLKNMRWSSPAVKGEPPAPRDSHTATAIRN
KILVYGGDCGDHYHGEVDVLNMDTMAWSRLEVKGSSPGVRAGHAAVSIGTKAYIIGGVGD
KQYYSDVWVLDTMTRSWSQLDIVGQQPQGRFSHAAVVINADIAIYGGCGEDERPLNELII
LQSGFEHPNGRYNVSMCKTFGTHWIQEKRKFLRTDHVQSNLVTKNNGLLSHRSTDVDSIN
PLICDLEDMDAKRRKTTGAKVLEIDLEQEEHSLSLSQHSSPSQSDQEQNIQKLPTSATGS
ILHAQLVAHMQPYNQTEAVKMIHRNGQETHFLGSNEALRQLKTKQFLRSALPPRQECPTQ
GAEQKSQLRPLFAPLNLQIGAEVRGTVDGAFDSGYLMTANVNGQLFRGVLFAPVPVVAAP
RPAINSQGMACSATVFQHPSAPHAIPIHARPPRQAMACGLPDCSLAMKQVKAVNAQPMKT
KNDLQDVVLTLGGPGGSVSQSRQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacttgacttgtttcatctctgattttgacccctgccgtcccttttttctcact
tcctccttaccagcttatcagtggccggtcttgtgtctctccagtacacagctgtccggg
gaagaagagagcgagggcggggagatgggatcgcggggagtggaggcggtgaagagaagg
aaggcgatgtggctctacccgaaggtgcctgggtttaaccctccggagagatggggacac
tctgtttgtttctttgatggagcggtctatgtcttcggaggttgctgtggaggaatgcat
ttcagcgatgtgcttgctctcaatctggaaaccatgtcctggagttcccttgttaccaca
ggccagaagcctggaagtcgagacagtcacagcgttgcgcttgcagggcacaagatggtt
gtgtttgggggtaccaatggcacaaagaaggtcaatgatctgcacattctagatctgagg
accaaagaatggagcaaaccgaattgtgtgggtactcagccttcaccgcgcgaaagccac
acggccactgtcataggagatgagaaacttttgatcttcggcggcagcggcgaaggagaa
gcaaattatttgaatgatgtgttcatacttgacctcaagaacatgagatggtcttcccca
gcagtcaaaggagaaccacctgcaccgagggacagccacactgcaactgccattaggaat
aagattctcgtatatggtggggattgcggcgatcattatcacggggaagtcgatgtgctt
aacatggatacgatggcttggtcgaggctggaagttaaaggatcgtctcctggtgttaga
gctggtcacgctgctgtgagtattgggaccaaggcatacatcataggtggagtcggcgac
aagcaatattatagcgatgtttgggtcctcgatacaatgacacgctcatggtcgcagcta
gacattgttggccagcagcctcaagggaggttttctcatgctgctgtagtcatcaatgct
gatattgcaatttacggaggttgtggggaggatgaacggccgctgaatgagttgatcatt
ttgcaatctggatttgaacatccaaatggtcgttacaatgtttctatgtgcaagaccttt
ggcacccactggattcaagaaaagcgcaagtttttaagaactgaccatgtgcaaagcaat
ttggttactaagaacaacgggctattgagtcatagatcaactgatgtggactcgataaat
ccactgatttgtgacttggaggatatggatgccaagaggaggaaaactactggtgctaaa
gtgcttgagatcgatctagagcaggaagaacattctctatcgctctcacaacactcttcg
ccatcgcaatccgatcaagaacagaacattcagaagctacccacttctgctactggctcc
atcttgcacgctcaattagtcgctcacatgcaaccatacaatcagacggaggcagtaaag
atgatccacagaaatggccaggaaacacacttcttgggcagcaatgaagctctgagacag
ctgaagacaaagcagttcctccgatcagctctgccgccaaggcaagagtgtccgacccaa
ggagcagagcagaaatctcaactaagacccctctttgcgcccttgaacctacagattgga
gctgaagttcggggaactgttgacggagctttcgattctgggtatctcatgacggcgaac
gtcaatggacagctttttagaggcgtcttattcgcgccggttccagttgttgcagctcca
agacctgcaataaactcacagggtatggcatgctccgccactgttttccagcatccttcg
gctccacatgcaattcccattcacgcaaggccaccaagacaagcaatggcttgcggcttg
ccagattgtagtcttgcgatgaagcaagtgaaggcggttaatgctcaaccgatgaagacg
aaaaatgatctgcaagacgtcgtcctcacgttgggaggaccaggcggcagtgtgtcccaa
agccgtcagtga
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