Zingiber officinale (ginger): 122023964
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Entry
122023964 CDS
T08725
Name
(RefSeq) WD repeat-containing protein DDB_G0290555-like
KO
K14841
ribosome biogenesis protein NSA1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122023964
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122023964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WDR55
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
122023964
NCBI-ProteinID:
XP_042438351
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All DBs
Position
9B:48794420..48805968
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AA seq
481 aa
AA seq
DB search
MPRTSAIECPGCPPLRALTTDALGLIKVVEVHGNPGILKVVERWGQPDASSGVLAASYAD
DKIEPLLAVARKNGSVEILNSLNGESLCNTHTKQFGLSDTSRQDDHIVGLHLLKTKGINL
SSRVATLLLCMENGNGCLKSIPMSGVLHDSDIGSQMSFNVCSAGKILCSSLAKSENFALF
GGKGVEVNTWDLGNCTRIWTAKSPRPNSLGLSPPPWFTAASFLSEEDHRKIAAGTNNHQV
RLYDTSAQRRPVMSVDYRETPIKAVCPDLHGYKVYVGNASGDLGSFDIRTGKLLGGFTGK
CSGSIRSIRKHPELSVIASCGLDCYLRVWDTNTRQLLSTVFLKQHLTNVIFDSHFSYEGP
GGNRHAQPSATQVHDYDSAGDNETVEDEVLPSARSSEASKMSKRSKTKKLDKEELPTSDN
GQVYETKETNEIKKRRSKIARQEDEDDGIGDTATQSEVEDGEKSSEKHGKRLKPKKRKVS
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaacaagtgcaattgagtgccctggatgtccacctctgagagccttgaccacc
gatgcacttggcctcataaaagttgttgaagttcatggtaatcctggaattctaaaggta
gtagaaagatgggggcagccagatgcttcttctggtgttcttgcagcttcttatgctgat
gacaaaattgaaccgcttcttgctgttgctcgcaaaaatggttcggttgagattctaaat
tctctaaatggagagagtttatgcaacactcacaccaaacaatttggattatcagatacc
tctcgtcaagatgatcacattgtcggcttgcatctccttaaaaccaaaggaataaatttg
tcttctagggttgccacactacttctttgtatggaaaatggaaatggttgcttgaaatct
attcccatgagtggtgtgctgcatgattctgatattggttctcaaatgtcattcaatgta
tgctctgccggtaaaatattatgcagttcattggctaaaagtgagaattttgccttgttt
ggagggaagggcgttgaagtgaatacatgggatcttggaaactgcacccgaatctggact
gcaaaatctcctcgtcctaatagccttggtttatcccctcctccttggtttactgctgct
tcttttttaagtgaagaagatcatcgaaagattgcagctggcacgaacaatcatcaggtt
cgtctttatgatacctcagcgcaaaggcggcctgttatgtctgttgactatagggaaact
ccaatcaaggcagtctgtccggacctacatggctataaagtttatgttggcaatgcttct
ggagaccttggttcctttgacataagaacaggaaaattgcttggaggttttactggcaag
tgctctggaagcatcagatctataagaaaacatccagaactttcggtaatagcatcttgt
ggtttagactgctatttgcgagtctgggatacaaatacgagacagcttttatctacggtc
ttcctcaagcaacatctcacaaatgtgatatttgattctcatttttcatatgaaggtcca
ggcggtaatcgacatgcccaaccaagtgcgacacaggtacacgattatgatagtgctggt
gataatgagactgtagaggatgaggtattgcccagcgctcgaagcagcgaagcatcaaaa
atgagcaaacgaagcaaaaccaagaaactagacaaagaggaattgcccacctctgacaat
ggtcaagtttatgaaaccaaggagacgaatgaaataaagaaaaggagaagtaagattgca
agacaagaagatgaagacgatggaataggtgataccgccacacaatctgaggttgaagat
ggtgagaaatcttcagaaaagcatggcaaaaggctaaagccgaaaaagaggaaggtttca
gcatga
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