Zingiber officinale (ginger): 122023990
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Entry
122023990 CDS
T08725
Name
(RefSeq) DNA polymerase eta-like
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122023990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122023990
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122023990
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
122023990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
UBM
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
122023990
NCBI-ProteinID:
XP_042438402
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All DBs
Position
9B:14947954..14957500
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AA seq
634 aa
AA seq
DB search
MPIARPEPQNARVIAHVDMDCFYVQVEQRKNPELKGLPAAVVQYNSWKGGALIAVGYEAR
RFGVKRSMRGDEAKMVCPNIQLIQVPVARGKADLNLYRDAGSEVVSILSTKGRCERASID
EVYLDLTDAAETMLSETPPEMLDTINEETLRSHVLGFNVDGDEREKNVKEWLCRSEADRQ
DKLLACGCIIVAQLRTEVLNETTFTCSAGIAHNKMLAKLASPMHKPAQQTVVPSSSVKDL
LASLPVKKMKQLGGKLGSSLQIDLGVKTVGDLLQFSQEKLQEHYGINTGTWLWNISRGIS
GDAVEDRLLPKSHGCGKTFPGPQALKTIASVENWVNQLCEELNERIQSDLDQNKRVAHTL
TLHARAFKENDMEPQRKFPSKSCPLRYGASKLKEDAMRLFDSGLRDFLGSQHIGWGVTSL
SIAASKITDVPQGTRSILKFLQGKDCSSMISDDPNGSPKQDLVLSSADVDLQRKDFEMVN
HDIRPRDLASEATRSDINNKLLDQTQKRTITAVRKIKDVGKSSILKFFQGSNSSFPTTSQ
AGETSNHDTALSPSFSEKGASTEVSMNKDDRHSQIQNGYDSWGFNVEDIDPSVLDELPIE
IQREVREWIRPLKRTNTSRKGSSIVHYFSPVKKE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcgcgtccggagccccagaacgcgcgcgtgatcgctcacgtcgacatggac
tgcttctacgtccaagtggaacaacgcaaaaatcctgaattgaagggtttgcctgctgct
gtagtacagtataactcatggaaaggtggtgccctgattgcagttggttatgaagctcga
agatttggtgtgaagcgttctatgcgtggagatgaggccaaaatggtatgcccaaatatc
caattaattcaagttcctgttgcacgtggtaaagctgatttaaatctgtacagagatgct
ggctctgaggttgtttccatactttcgaccaaagggcgatgtgagcgagcgtcaattgat
gaagtttatctggatcttactgatgctgctgaaacgatgctatcagaaacaccaccggag
atgctagacacaattaatgaagagactctgaggtcacacgtattaggttttaatgttgac
ggtgatgaaagggaaaagaatgtcaaagagtggctctgtcgaagtgaagctgaccgtcag
gacaaactattagcttgtggttgtattattgtggcacagcttcgtactgaagttttgaat
gaaacaacattcacatgttctgctggcattgcacacaacaagatgttagcaaaacttgct
agtcctatgcataagcctgcacaacagactgttgtaccatcctcttcagttaaggatcta
ctagcatccttgccggtgaagaaaatgaaacaacttggtggaaagcttggaagctcccta
caaatagatcttggagtgaagactgttggtgatttgctacagtttagtcaggagaagttg
caagagcactatggtattaatacaggcacatggttgtggaacatctcgagaggtattagt
ggagatgctgttgaggaccgccttctgcctaaaagccatggttgcggaaagacatttcca
ggtccacaagcattgaagactattgcttctgttgagaactgggtcaatcaattgtgtgaa
gaactaaatgagcgtatacagtctgacttggatcagaacaaacgtgttgcacatacattg
accttacatgccagagcatttaaggaaaatgacatggaaccccaaaggaaatttccttca
aaatcttgtcccttgcgttatggagcttcaaaactcaaagaagatgctatgcgattattt
gattctggtcttcgtgattttttgggttcccaacacattggatggggagtaacgtcgctt
tctattgcagcaagcaaaataactgatgtgccgcaaggaacaaggtcaattctgaagttt
ctccaaggcaaagattgctcctccatgatatcagatgatcctaatgggtctcctaaacaa
gatcttgtcttgtcttctgcagatgtggatctacaacgcaaagattttgaaatggtgaac
catgacattagaccaagggaccttgcttctgaagctactagaagtgatatcaacaacaaa
cttctagatcagacacaaaagagaaccattacagctgtcagaaagataaaagatgtggga
aaatcctctatcttaaagttcttccaaggcagtaattcctcttttcctacgaccagccaa
gccggtgaaacatccaatcatgatacagcattgtcgccatcattttctgagaaaggagca
tccacagaggttagcatgaacaaagatgatcggcacagccagattcagaatggttatgat
tcatggggttttaatgtggaagatatcgatccgtctgtcttagacgagttacctattgag
atccagagagaagtcagagaatggattcggccactgaagcgtacaaatacatctagaaag
ggttctagcattgttcactatttttctccagtaaaaaaggaataa
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