KEGG   Zingiber officinale (ginger): 122024001
Entry
122024001         CDS       T08725                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2-like
  KO
K12195  charged multivesicular body protein 6
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03250  Viral life cycle - HIV-1
zof04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122024001
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122024001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122024001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122024001
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    122024001
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122024001
  Exosomal proteins of other body fluids (saliva and urine)
   122024001
SSDB
Motif
Pfam: Snf7 TINF2_N RE_Eco47II Glyco_hydro_85 Rota_NSP4
Other DBs
NCBI-GeneID: 122024001
NCBI-ProteinID: XP_042438416
LinkDB
Position
9B:complement(102382321..102387320)
AA seq 219 aa
MGNIFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEVVIEAEKQAARDLIREKRKDRALL
ALKKKKTQEELLKQVDGWLINVEQQLADVELASRQKAIFESLKAGSNAIKSIQSEISLED
VQKLMDDSAEAKAYQEEINAILGESLSPEDEEEVLAEFENLETEITLQSLPTVPSQALEP
IADSQVEIKEDELIDLPDVPSGDISNQAARKTKEEPLPA
NT seq 660 nt   +upstreamnt  +downstreamnt
atgggcaacatattcgtgaagaagcccaagatcacggaggtggatcgagccatcctgtct
ctcaagacacaacgccgtaagctcgctcagtaccagcagcagcttgaagttgtgattgaa
gctgagaaacaagctgctagggacttgattcgggagaagaggaaagatcgggcattgctt
gcacttaagaagaagaaaactcaagaagagctactcaaacaagttgatggttggcttata
aacgttgagcagcaattggcagatgttgaattagcaagcagacagaaagctatatttgaa
agcctgaaggcaggaagtaatgccattaagtctatacaaagtgagatcagtttggaggat
gttcagaagcttatggatgattccgctgaggcaaaggcttatcaagaggaaataaatgca
atcctgggagagagtctatctcccgaagatgaggaagaggttctagcagagtttgagaat
ttggaaactgagattaccctccaatccttgcctacagttccttctcaggcattagagcct
atagctgattcccaggtcgagatcaaagaagatgagcttatcgatcttcctgatgtaccc
tctggtgacatctcaaatcaagcagcaagaaaaacaaaagaggagccactgcctgcatga

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