Zingiber officinale (ginger): 122024084
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Entry
122024084 CDS
T08725
Name
(RefSeq) anaphase-promoting complex subunit 7-like
KO
K03354
anaphase-promoting complex subunit 7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122024084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122024084
03036 Chromosome and associated proteins [BR:
zof03036
]
122024084
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
122024084
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122024084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_19
TPR_8
TPR_1
TPR_12
TPR_16
TPR_11
ANAPC3
TPR_CcmH_CycH
ARM_TT21_N
TPR_20
PknG_TPR
Iml2-TPR_39
TPR_9
MIT
BTAD
MIT_ATG1
TPR_4
Motif
Other DBs
NCBI-GeneID:
122024084
NCBI-ProteinID:
XP_042438565
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All DBs
Position
1A:complement(44995791..45014058)
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AA seq
561 aa
AA seq
DB search
MEVSKDHIATLLDNGLFGSAQMLGCFLVTSPVTNSEASPYLKAENLVLQGDALYGEKEFR
RALNMYKQALQHCKFISKQSMNNSRSSFSTSSSRSSSPSSMNGSPINENEVKFKITLCHC
ALNENRAALVEIEGIPPKARTLRMNLALGKLYRISRHNRSAIACYKDCLRNCPYVLEAVT
ALAELGVSSKEILSLFPQTSNRGRLPFDHLDPARWLHRYVEAQCCIASSDYKGGLDHLAE
LLQQFPNNVHILLEIAKVEAIIGRHDEAIMNFEKIRAIDPYIVTYMDEYAMLLKQKSDIS
KLNKLVQDLLNLDHTRAEVYVALSALWERKDDRKALSYAERSLRIDDRHISGHIMKGNLY
LSLNRPDAAVTAFRAAQELRSDLRSYQGLVRSYLALAKNKEALFTAREAMKIMPQSAKAL
KLVGDVHASSSSGREKARKFYESALRLEPGFLGAALALAELHVVDGRHKDAVSLLERYVK
DWADDSLHIKLAQVFAATNMLSEALTHYQAALRINPQNEAAKKGLERLEKQMKGMDPDAP
DEEDDNEAEDAEGDQEEAEML
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttccaaagatcacatcgccactcttcttgacaacggcctcttcggctccgcc
cagatgctgggttgcttccttgtaacttcccctgtgacaaatagcgaggctagtccatat
ctgaaagctgagaacttggttcttcaaggtgatgctttatatggggagaaagaatttcgt
agggccttgaatatgtacaagcaagcacttcaacattgcaaatttatttccaaacaatcg
atgaacaattcaagaagttcattttctacatcaagtagtaggtcatcatcaccgagttct
atgaatggttctccgatcaatgaaaatgaggtgaagtttaaaattacactttgtcattgt
gcacttaatgaaaaccgtgctgcccttgtagagatagaaggaattcctccaaaagcaaga
acacttcgaatgaatctcgcattggggaagctttatcgcatttctaggcacaaccgctct
gccattgcatgctacaaagattgcttaaggaactgtccatatgttttggaggcagttaca
gctttggctgagttaggagtttcttccaaggaaatcttgtctttatttcctcagacatca
aatagaggaagattaccctttgatcacctagatcctgctcggtggttgcatcgttatgtt
gaagctcagtgttgcattgcttcgagtgactacaaaggcggtcttgaccatctcgctgaa
ctattacagcaatttcctaacaatgttcacattttattggaaattgcaaaggttgaagct
attattggaagacatgatgaagcaataatgaatttcgaaaagattcgagcaattgatccc
tacattgtgacttatatggatgaatatgccatgcttctaaagcaaaagtctgatatatcc
aagctaaacaagttagtacaggatctgctaaaccttgaccatacaagagcagaagtttat
gttgctttgtcagcattatgggaaagaaaggatgaccgaaaagctttatcttatgctgag
aggagtcttaggatcgatgataggcatatctctggccacattatgaagggtaacctgtat
ctgtcattgaaccggccagatgctgcagtcactgctttcagagcagctcaagaattaaga
tctgatcttcgttcataccaaggtctagtccgttcatatcttgctcttgcaaaaaacaag
gaggcactttttactgcacgggaagcaatgaaaataatgcctcagtctgcaaaagctctc
aagttggttggagatgttcatgctagtagttctagtgggagagagaaggcaagaaagttt
tatgaatctgctctacggcttgaacctggctttctaggagctgctttagcattggcagag
ttgcatgttgttgatggacgtcataaagatgccgtctcactgcttgagagatatgttaaa
gactgggctgatgactccctccatatcaaattggctcaagtttttgcagctacaaatatg
ttatcagaggctctcactcattatcaagctgctttgaggataaacccgcaaaatgaagcc
gccaagaaaggtttagagcgcttggagaagcagatgaagggaatggatcctgatgcaccc
gacgaagaagacgataacgaagctgaagatgccgaaggtgatcaagaagaggccgagatg
ctttaa
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