Zingiber officinale (ginger): 122024099
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Entry
122024099 CDS
T08725
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 2
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122024099
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122024099
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122024099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
DUF1351
V-SNARE
Dit_C
Filo_VP35
Allexi_40kDa
DUF6279
FapA
Motif
Other DBs
NCBI-GeneID:
122024099
NCBI-ProteinID:
XP_042438579
LinkDB
All DBs
Position
9B:complement(5581451..5584823)
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AA seq
330 aa
AA seq
DB search
MAFFTHHHLQQPQPPAQQQQQQQLAVPFRNFVPINGQISAPVDFISASLADPTHHSVSRF
MGLSPGAGTEVDGGLNGWEPMRKRIKEQDLLENSQISSIDFLHTGSVSTGLGLSLDDRRI
VASSGESQLLLLPTFDQDINHEMQRMDAEIDQFIKLEGERLRKSIIEKLQMKQFQTIASL
EEKIRRKVREKESEMEDINKRNAELEEQLKQLALEASTWQQRAKYNESLINSLKYNLEQL
YAQRKDTKEGCGDSEVDDAASCCNGDMGLQLMSKQNNDVLSKVCKACGVNDICMLLLPCK
HVCLCKECESKLSFCPSCHTSKLIGMEIYM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggccttcttcacccatcaccaccttcaacagccgcaacctccggcgcaacagcagcag
cagcagcagctggcagtccccttcaggaatttcgtgccgatcaatgggcaaatctctgcg
cctgtcgatttcatttccgcctccttagctgatccgacccatcattctgtcagtcggttc
atgggcctctccccaggcgctggaacggaggtggacggtggattgaacggctgggagccc
atgaggaagcggatcaaggagcaggatcttctcgagaattcccagatttcgtccattgat
ttccttcataccgggtcagtatccaccggattaggactttcactggacgatcggaggatt
gtggcttcatctggggagtcacagcttctacttctaccaaccttcgaccaggacatcaat
catgagatgcaaagaatggatgcagaaattgatcagttcatcaagctcgagggtgaacgt
cttcggaaatcaataatagagaagcttcagatgaaacaatttcaaactatagcttccttg
gaggagaagatccggaggaaggtaagggagaaagaatcagaaatggaagacataaacaag
aggaatgcggagcttgaggaacagttgaaacagttggccctggaagcaagcacatggcag
caaagggcgaagtacaatgagagcttgataaattccctcaaatataatcttgagcaacta
tatgctcagagaaaagacacaaaggaggggtgcggtgacagcgaggtagatgatgctgcc
tcatgttgcaacggggatatgggcttgcagttgatgtcgaagcagaataatgatgtgttg
tctaaggtgtgcaaggcgtgcggcgtaaatgacatttgcatgcttttattgccctgcaag
cacgtatgcctctgcaaagaatgtgaaagcaagcttagtttctgcccttcatgtcacaca
tctaaattgatcggcatggagatctatatgtga
DBGET
integrated database retrieval system
