Zingiber officinale (ginger): 122024119
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Entry
122024119 CDS
T08725
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1-like
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122024119
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
122024119
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Torus
zf_CCCH_4
zf-CCCH
SCAF11-like_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
122024119
NCBI-ProteinID:
XP_042438604
LinkDB
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Position
9B:120158604..120169647
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AA seq
620 aa
AA seq
DB search
MPKRSTKASADSATDPSGEVDALSAGDGDESFLEDQRECDEAGEEVVEEERVQEIEVDEV
EGKGGGGGSDLPGHHDDDTSKTHEGCCKEPMLLSSNSEKSSVNSINSQTEYLRGDNLGND
SPSKLHIKKISENNNGDLSQPTSQRRPRSSSPCVQNEHASKNPAIICDFFARGWCIKGSS
CRFLHKKEVVGYVSQEIQEDKGTTEDSIYCKGNSTKSDFLLQRSLVRTYGGEVHGFSQFT
SKNSEHFPVDGVRQTILLGKCPVTDVPVHHDCSNNFPDRRSASVEISSRHLSGMMYNEMP
SGMHRYDASFSRESLIKNPLASESNYVVGGSSMPLNVHNDSCDIYSIRKKPDDLAREYQQ
SHFMLHDSYTSGLSGDSLSFSGLPQKLEENTWETSVPFRPSVSLAPFIKSYCDSQYDPFI
DSIDHSKQVSPSASPKGTLGSSQSQHPVGAPIAGDSKSVYDATRSVNSFTSATVGILGTS
KPMHECSINTTAISPGLTTNAEEKGQIPDLAIHPRVDKSELGDNSSIEKVKSARESKEMK
IFHAALVDYLKKLLKPSWKEGRLNKDTHKLIAKKAAEKVLGALQPHQVPNGPDAIDQYLL
SSRPKLLKLVEAYVDKYGRS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgctcgacgaaggcatccgctgattctgccaccgatccatcgggggaggtc
gatgccctctcggccggcgacggcgatgagtccttccttgaagaccagagagagtgcgac
gaagcgggcgaggaggtggtggaagaggaacgagtgcaagagatcgaggtagatgaggtg
gaaggaaaaggaggcggcggtggctccgatttgcctggccaccacgacgatgatacaagc
aaaacgcatgaaggctgttgcaaggaaccaatgttgctttcttccaattccgagaaatct
tctgtaaattcaatcaattctcagactgagtatcttaggggtgacaaccttggcaatgac
tctccatctaagttacatatcaaaaagatttctgaaaacaataatggagatctcagtcag
cctacttcacaaagaagaccaaggagctcctctccttgtgtccagaatgagcatgcaagt
aaaaatcctgcaattatatgcgacttttttgctagaggctggtgcatcaagggaagctct
tgtagatttcttcacaagaaagaggtggttggctatgttagtcaggagatacaggaagat
aagggtaccactgaagattccatttattgcaaagggaattcaacaaaatcagattttctt
ttgcaaagatcccttgtgcgcacatatggtggggaggtgcatggattttcccagttcaca
tctaagaatagtgagcattttccagtggatggagtaagacagacaatcttactaggaaaa
tgcccagtaacagatgtgccagttcatcatgattgtagtaacaattttccagatagacgc
tcagccagtgttgaaatttcatctcgtcatttgtcagggatgatgtacaatgaaatgcct
agtggaatgcatagatatgatgcatcattctcgagagaatctttgattaagaatccattg
gcgtcagaatctaattatgttgtgggtggatcctctatgccacttaatgttcataatgat
agctgtgacatctattctattagaaaaaagccagatgaccttgctagagaatatcagcag
agccatttcatgcttcatgattcttacacttctggcttaagtggggattctctgtcattt
tctggtctgccacaaaagcttgaagagaatacttgggaaacctctgtacctttccgaccc
tcagtttcccttgcaccttttattaaatcctattgtgatagccaatatgatccctttatc
gacagtattgaccattcaaaacaagtttcaccttctgcttctccaaaaggtactcttgga
agttcacaaagtcagcatccagttggtgctcctatagctggagattctaaatcagtatac
gatgccaccagatctgtgaattcttttacctcagctactgtaggaattcttggtacgagc
aaaccaatgcacgaatgttccatcaacactactgctatctcacctggccttactacaaat
gctgaagagaaaggacagatccctgatttagctattcatccacgtgttgataagtcagaa
cttggggataatagcagcatagaaaaggtaaaaagtgctagggaatcaaaggaaatgaag
attttccatgctgctttggtagattatttgaagaaattgctaaaaccatcatggaaggaa
ggtcgcttgaataaggatactcataagctaatagctaagaaggcagctgagaaagtcttg
ggtgcactacaaccacatcaagtccctaatggcccagatgcaatagaccaatatctatta
tcttccaggccaaaacttttaaaactagtggaggcttatgtggataagtatggtaggtcc
tga
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