Zingiber officinale (ginger): 122024129
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Entry
122024129 CDS
T08725
Name
(RefSeq) phenylalanine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122024129
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122024129
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122024129
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122024129
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122024129
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122024129
Prokaryotic type
122024129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
122024129
NCBI-ProteinID:
XP_042438614
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All DBs
Position
9B:complement(21468519..21474433)
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AA seq
458 aa
AA seq
DB search
MLISRGGTCARALLLLSTRMAASSISSNLIAPASASRRIHGSKPFSAQLLSYPPFLSRAS
LFSSHASVHSNKVHKKSNSRVAALLEIGGVKIAKDDVVRESDPTNNVPDNIFSKIGLQLH
RRDNHPIGILKNAIYEYFDTSYSSMFVKFDDLCPIVSVQQNFDEVLVPADHVSRSYNDTY
YVDAGTVLRCHTSAHQAELLRAGHSHFLVTGDVYRRDSIDSTHYPVFHQMEGVRVFSPNE
WEVSSTDATSYAATNLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIYFQEKWMEV
LGCGVTEQEILNRNGRKDSVAWAFGLGLERLAMVLFDIPDIRLFWSTDQRLTSQFSAGKL
GVKFKPFSKFPPCYKDISFWISDSFTENNLCEVVRGIAGDLVEEVKLIDNFTNKKGMTSH
CYRIAFRSMERSLTDEEINQLQWSIRETVQTKLHVTLR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcttatctcaagaggtggcacctgcgcccgcgcgctgctgctgctctccactcgcatg
gcggcatcctcaatctcctccaacctcatcgcccccgcctctgcctcacgccgcattcat
ggttcgaagcccttctccgcccagctcctctcctatccgccctttttatcccgcgcctcc
cttttctcctctcatgcctctgtccactccaacaaggttcataagaaatccaattccagg
gtcgcggctctcctcgagattggcggcgtcaaaattgccaaagatgatgttgtccgggaa
agcgatcccacaaacaatgtgccagacaatatattttcgaagatcggtctgcaactacat
cgaagggacaaccatccgattggaatattgaagaatgccatctatgagtatttcgacacc
agttactcctccatgttcgtcaaatttgatgacctttgtcccattgtttccgtgcagcag
aattttgatgaggtgttagtgcctgctgatcatgtaagcaggagttacaatgatacatat
tatgttgatgcgggcactgtcttaaggtgtcataccagtgctcatcaggcagagttattg
agggcagggcacagccattttcttgtaactggcgatgtgtaccgtagagactccattgat
tcaacccattatcctgtgtttcatcagatggaaggggtccgtgtcttctctccaaatgaa
tgggaggtttctagcactgatgcaacatcttatgcagcaacaaatctaaagaagtgtctc
gagggtttagcaaggcatctttttggtgctgtggaaatgcgatgggttgatacttatttt
ccattcaccaacccatctttcgaattagagatttattttcaggaaaaatggatggaagtg
ttgggatgtggagtgactgaacaggaaattcttaacagaaatggtaggaaagattctgtt
gcatgggcctttgggcttggattagaaagacttgcaatggttctctttgatataccagat
attcgacttttttggtcaactgatcagaggcttacttcacaattttccgcgggcaagctt
ggcgtcaagttcaaaccattttccaagtttcctccctgctacaaggatattagtttttgg
atcagtgattcctttacagagaacaacttatgtgaagtcgttagaggaattgctggggat
cttgtggaagaggtgaagttgattgataatttcaccaataagaagggtatgaccagccat
tgttacagaattgcattcagatccatggaaaggtcgcttaccgatgaggagataaaccag
ctacagtggagtatcagggaaacagtgcagacaaagttgcatgtcacactacgataa
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