Zingiber officinale (ginger): 122024245
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Entry
122024245 CDS
T08725
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122024245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122024245
03036 Chromosome and associated proteins [BR:
zof03036
]
122024245
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122024245
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122024245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
DcpS_C
Motif
Other DBs
NCBI-GeneID:
122024245
NCBI-ProteinID:
XP_042438753
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All DBs
Position
9B:675931..680197
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AA seq
352 aa
AA seq
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MDEGSNSTTSFPKSHVRGGGGGLFPLGTPAFSSCQSASTSGSAGSPSSRSEIVATTPASE
NTLVRLNHLDIHGDGEGTPEGAVSGKKKKRSSRAVSGDKSGRGLRQFSMKVCEKVESKGR
TTYNEVADELVTEFTNPQNNPGSQDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIHW
KGLPRTSLNDIEELKAERIGLRSRIDKKTAYLQELHDQYEGLQNLVQRNDKLYGSGNLPS
GGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVVKAMGLCMREKNDG
SLAPCSDGGDGSSVIGASQKHSSPSSRANSMTRVLASPPKPGILKSRVKNEH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggggagcaatagcaccactagcttccccaagtcccacgttcgcggcggcggc
ggcggcctcttccccctcggtacgccagccttctctagctgccagtcggcttccactagt
ggcagcgccggctcgccctcaagcaggagtgaaatagtggcaacgactcccgccagcgag
aataccttggtcaggctgaaccacctcgatatccacggggacggcgaggggacgcccgaa
ggagccgtgagtggcaaaaagaaaaaacggagttctcgggctgtttcaggtgataaaagt
ggcaggggtcttcggcaattcagcatgaaagtttgtgagaaagttgaaagcaaggggcga
actacttacaacgaggttgcagatgaacttgtcactgaatttacaaatccacaaaataat
ccaggatctcaagatcagcagcaatatgatgagaagaacatacggcgaagggtatatgat
gcactaaatgttctcatggctatggatattatctctaaagataaaaaggagatacattgg
aaaggtttacctcgaactagtctaaatgatattgaagaattaaaggcagagagaattgga
ttgaggagtagaattgataagaaaactgcatatttgcaagagttgcatgatcaatatgaa
ggtctccaaaacttggttcaaagaaatgacaagttatatggatcaggaaatcttccatct
ggtggcgttgctttaccatttatcttggttcagactcgtccacatgctacggttgaggta
gaaatttcagaagatatgcaacttgtacattttgacttcaacagtaccccgtttgagcta
catgatgattcctacgtggttaaagcaatgggattgtgcatgcgagaaaaaaatgatggt
tctctagcaccttgctctgatggaggtgatggctcgagcgtgataggtgctagtcagaag
cactcctcaccatcttctagagctaattctatgaccagagttttagcttctcctcctaaa
cccgggattctaaaatcgcgtgtgaagaatgaacattaa
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