Zingiber officinale (ginger): 122024259
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Entry
122024259 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122024259
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122024259
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122024259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
zf-C3HC4_2
UBA_ARIH2_N
zf-RING_2
zf-C3HC4
PH_S11IP_C
Motif
Other DBs
NCBI-GeneID:
122024259
NCBI-ProteinID:
XP_042438771
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Position
9B:complement(3386934..3388700)
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AA seq
588 aa
AA seq
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MDSEDDMHDANDLESVDDDFYSGDTAMGNDEGDDFDFVDNESDDSEDITYHRQQQNYTIL
SEADIRLRQEEDISRVSTVLSISRSSACILLRHYQWSVSRVNEEWFADEEHVRKVVGLLE
KLVEVQNPRELTCGICFENYPRDRMTSAICGHPFCGTCWRGYVGTSIRDGPGCLMLRCPD
PSCGAAVGQDMIDLLASHEDKEEYSRYLLRSYIEDNRKTKWCPAPGCEFAIEYVIGSGNY
DICCNCSYGFCWNCTEEAHRPVDCDTVAKWILKNSDESENMNWILANSKPCPKCKRPIEK
NQGCMHITCTTPCKFEFCWLCLGPWSEHGERIGGFNACNRYEAAKQEGAYDESERRREMA
KKSLERYTHYYERWATNQSSRQKALSDLHSVQNEKLEKLSVRQRQPESQLKFMIEAWLQI
VECRRVLKWTYAYGYYLPEHEHAKRQFFEYVQGEAESGLERLHQCAEKELQVYLDAETPM
KDFDDFRTKLAGLTSVTRNYFENLVRALEAGLKDVGSSNSEATCSKTSSSKSLGTKGKGG
KSKATGNNSRLAGGPSHSLDESNLWFCHHCTYANPKSAKACQMCEHRR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaggatgacatgcatgacgccaacgacctagagtcggtggacgacgatttc
tatagcggggacaccgcgatgggcaacgatgaaggcgacgatttcgatttcgtcgacaac
gagtcggatgactccgaggacatcacctatcaccgccagcagcaaaattatactatttta
agtgaagctgatataagactgcgccaagaagaagacattagcagggtttcaactgtgctt
tcaatatccagatcatctgcatgcattcttctacgccattatcaatggagcgttagtcga
gtaaacgaagaatggtttgcagatgaagaacatgttcgaaaggttgttggtctgttggag
aagctagttgaagtgcagaatcctagagagcttacttgtggaatttgtttcgaaaactat
cctcgcgacaggatgacctctgctatttgtggccatcctttttgtggcacttgctggaga
ggttatgttggcacatcaataagagatggccctggatgcttaatgctgaggtgtccagat
ccatcatgtggtgctgccgttggtcaagacatgattgatctattggctagtcatgaagac
aaagaggagtattctcgctatcttcttagatcttatattgaagataatagaaagacaaaa
tggtgccctgctcctggttgtgaatttgcaatcgagtatgtaattggcagtggaaactat
gatatttgctgcaattgctcgtatggcttctgttggaattgcactgaggaggctcatcgg
ccagttgattgtgatacggtggcaaaatggatactgaaaaacagtgatgaatctgagaat
atgaactggatattggccaattcaaaaccttgtccgaagtgcaaacgcccaattgagaaa
aatcaaggatgcatgcatattacatgtacaactccttgtaaattcgagttttgctggcta
tgtcttggtccatggtcagaacatggggaaaggattggtggatttaacgcctgtaatcgc
tatgaagctgcaaagcaggaaggagcgtacgatgaatctgaaagaagaagagaaatggct
aaaaaatctctggaaagatatactcattactatgaacgatgggcaactaatcagtcatca
aggcaaaaggcactttcagatttacatagcgtgcaaaatgaaaagcttgagaaactgagt
gtccgacaaagacaacctgagtcacagctcaagttcatgatagaagcctggttacagatt
gtggaatgtaggcgagtgttgaaatggacatatgcgtatggttattatctacctgagcac
gaacatgccaagagacagttctttgaatatgtgcaaggtgaggccgagtctggattggaa
cgtcttcatcaatgcgctgagaaggagctccaggtataccttgatgcagaaactcctatg
aaagatttcgatgatttccgcaccaagttagctggtttgacgagtgtgacccgcaactac
tttgaaaacctagtccgagccctggaggctggtttaaaggatgtaggctcttctaatagc
gaagctacctgtagtaaaacttcaagttcgaagagtttgggcacaaagggaaagggtggc
aagtctaaagcaacaggaaacaattccagattagctggtggtcccagccacagcttggat
gagagcaacctctggttctgccatcactgcacctatgccaaccctaaatctgccaaggca
tgccagatgtgcgagcatcggaggtag
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