KEGG   Zingiber officinale (ginger): 122024368
Entry
122024368         CDS       T08725                                 
Name
(RefSeq) transcription factor-like protein DPB isoform X1
  KO
K04683  transcription factor Dp-1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122024368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zof03000]
    122024368
   03036 Chromosome and associated proteins [BR:zof03036]
    122024368
Transcription factors [BR:zof03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    122024368
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122024368
SSDB
Motif
Pfam: E2F_TDP
Other DBs
NCBI-GeneID: 122024368
NCBI-ProteinID: XP_042438914
LinkDB
Position
9B:complement(81140035..81144371)
AA seq 212 aa
MNDGSKNTARASFGTPAFSGCQSASTSSSVGSPSSRIEPVATTPASENTLVRLNHLEIHR
DDVGTPEVAVGAKKKKRGARAVSGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVTE
FADPNNNPGSQDQLSENGLTFQRLCSFNPGCTSSITRHILTINIYYCLIIVEVIRGSIKG
NSLRWPGTQKSPHVLHCVHASIVHFLFTQPPY
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaacgacgggagcaagaacactgccagagcctccttcggcacgccagccttctccggc
tgtcaatcggcctccaccagcagcagcgtgggctcgccctccagccggatcgagccagtg
gcgaccacgcccgccagcgagaacaccttggtaaggctgaatcacctcgaaatccacagg
gacgacgtgggaacgccagaagtagccgtgggcgctaaaaagaaaaaaaggggtgctcga
gcagtttcaggtgataaaagtggaaggggactccgacaattcagcatgaaagtttgtgag
aaagttgaaagcaagggacgcactacttacaatgaggttgcagatgaacttgttacagag
tttgcagatcccaacaataatccaggatctcaagatcagctaagtgaaaatggcctgacc
ttccaaagattatgctcatttaatccaggttgtacatcttccatcaccagacatattctg
acaataaatatttactactgtctcattattgtggaggttataagaggcagcataaaagga
aattctcttcgttggccaggtacacaaaaaagtcctcacgttttacattgcgtgcacgca
tctattgttcattttcttttcactcaaccaccgtactga

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