Zingiber officinale (ginger): 122024410
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Entry
122024410 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 2-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122024410
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122024410
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
LRR_At1g61320_AtMIF1
LRR_4
Motif
Other DBs
NCBI-GeneID:
122024410
NCBI-ProteinID:
XP_042438967
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Position
9B:complement(116572613..116574640)
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AA seq
482 aa
AA seq
DB search
MDAVLCDELVQEILRRLPPSSAPSASLVSKRWLSLLRSSTTSLSLAVRPRLPNSPSLSSI
LAHYPSVSDLTVVSNRAEEEDEDGGADALVFVIASAACNRRLTRLRLIPAAQVSPSVLQS
SAAAFASLTSLQIASLFPLSFRWLAALPFLKSFSLVRSRAKRPRIQELPDDDDDGENAIV
MLPLESLSLSGIYGSDRGLSWLWRRCGGLRWLQLRACEGTGDGASSSAFPLCLTGLLGLE
LRTCRSIADRVLLLAADRCRNLASFLLYDGGSRDALHHFIHRRGAALRTLDLRLPLDLHN
DHLFAIAAEDRDRYRLCHHQLASLRLHSCCLVTGDGLRSLALSPAGAAIEELALVNCDVV
EREPGLLTFLSQSMHRLRRLDLSHNETMTDKEVGSMLASCKNLVEIRLKGCRTLTGDSLN
SLLKHCGKQVELLDISRCPAIGNEAIDKFVTNAGRLSQLIVEEDKVTEAVRAWLSRKAIR
LS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtgctgtgcgacgagttggtgcaggagattctccggcgactgccgccgtcc
tccgccccctctgcttccctcgtatccaagcggtggctctccctcctccgatcctccacc
acctccctctccctcgccgtccgtccgcgtctccctaattcaccgtcgctctcctccatc
ctcgcccactacccttccgtctccgacctcaccgtcgtctccaatcgcgcggaggaagaa
gatgaggacggcggcgccgacgcgctagtgttcgttattgcttccgccgcttgtaaccgc
cgcctcacccgattaagactcatccccgccgcccaggtctccccttccgttctccaatca
tccgccgccgccttcgcctccctcacctccctccagatcgcctccctgtttcccctctcc
ttccgctggctcgccgccctcccctttctcaaatccttctccctcgtccgctcccgcgcc
aaacgcccccgtatccaagaacttcccgatgatgatgacgacggtgaaaacgctatcgtg
atgctgccgcttgagagtctgtcgttgtccgggatttacggctccgatcgcggcctctcc
tggctgtggcgccgctgcggcggtctccgctggctgcaattgcgggcttgtgagggaacc
ggcgatggcgcctcttcgtcggctttccccctctgcctcaccggccttctcgggctcgag
ctccgcacctgccgctccatcgccgaccgcgtcctcctccttgctgccgatagatgccgc
aacctcgcctccttcctcctctacgacggcggcagccgcgacgcccttcaccacttcatc
caccgccgcggcgccgcgctccgcaccctcgacctccgcctcccgcttgacctccacaac
gaccatctcttcgccatcgcagcggaagatcgcgatcgctaccgcctctgccaccaccag
ctcgcctccctccgcctccatagctgctgcctcgtcaccggagatgggctccgctccctc
gctctctctccggctggcgccgctattgaagagctcgcgctggtgaactgtgacgtggtg
gagcgcgagcctgggctactcaccttcctcagccagagcatgcatcgcctccggcggctc
gacttgtcgcacaacgagacgatgaccgacaaggaggtgggatccatgctagcttcctgc
aagaatctagtagagatcaggctcaaaggttgcagaaccctgaccggcgattccctgaac
tccttgctcaagcactgtggcaagcaggtggagctgctagacatttcgcgatgcccagcc
atcggaaacgaagcaattgataaatttgtcaccaacgccggccggttgagccagttgatc
gtggaggaggacaaagtgactgaagcagtcagagcttggctatcgcggaaagccattagg
ctcagttaa
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