Zingiber officinale (ginger): 122024492
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Entry
122024492 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122024492
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122024492
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122024492
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122024492
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122024492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Phage_tube_C
DGKI
Motif
Other DBs
NCBI-GeneID:
122024492
NCBI-ProteinID:
XP_042439070
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All DBs
Position
9B:complement(30330940..30335275)
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AA seq
535 aa
AA seq
DB search
MKQPPVLVFGSFTKAESKFFKKQSVEDDSLLVENQGLQFGSSNFRSLYKGSASETIKVNS
SVNSKGVQISNFLIANGQVCTTSSAAKYDGKPVNTRTQSNGCTSRCSSHSIGVAENGHYN
SDLASSRESDHGITRETTLASPKGGFQASKNHSVLSDSGAAPTPTVETLEITSKKEQVVE
CLLPRGLVNSGNICFLNATMQGLLACAPFVQLLQELRNQSISKIGFPTLHAIVDFICQFD
MPDDSRLTTNGKGVINTGKAFSPTMFDAVLKGFTPDLPAGIFGRHRQEDAQEFLSFVMDQ
MHDELLKLDGHLSDSSGGKTPIVSSADEDGWETVGPKNKSAVTRTQSFVPSRLTTIFGGQ
LRSLVKTTGNKASATIQPFLLLHLDIFPDHVHSIEDALRLFSAPETIEGYKASHGKAGVV
NASKSVKIQTLSKILILHLTRFSYGSKGSTKLNKPVHFPLELDIGRELLVSLSERRRYEL
VATITHHGREPTKGHYTADARHGCVWLRHDDASVTAVNTKNVLHDQAYVLFYKQM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacctccggttttagtctttggttctttcaccaaagccgagtctaagttcttc
aagaaacagtcagttgaagatgattcacttcttgtagaaaatcaaggattgcagtttgga
tcctcaaactttcgaagtttatacaaaggctctgctagtgaaactataaaagtcaattca
tctgtaaattcaaaaggtgtccaaatttcaaattttttaattgcaaacggccaagtatgc
actacttcatcagcagctaagtatgatggaaaacctgtgaatacaagaacccaatcaaat
ggatgcaccagtagatgttcctcccactctataggagttgctgaaaatgggcactataac
tctgatttagcttcttctcgagaatctgaccatggaattacaagagaaactactctagca
agcccaaaaggtgggttccaagcatcaaaaaaccatagtgtgctttctgattcaggggca
gctccaactcccacagtggaaactctggaaattactagtaagaaagaacaagtagtcgaa
tgcttattgccccgtggactagtaaattctggaaatatatgttttttaaatgcaacaatg
caaggacttctcgcctgtgcaccgtttgttcaacttttgcaggagttaaggaatcaaagt
atctcaaagattggctttccgacattgcatgcaattgttgattttatatgtcaatttgac
atgccggatgattcaagactgactaccaatggaaagggagttatcaatactgggaaggct
tttagcccgactatgtttgatgctgttttaaaaggttttactccagacttgccagctgga
atatttggcaggcatagacaagaggatgctcaggaattcttgagttttgtcatggatcaa
atgcatgatgaattgttgaagcttgatggtcatttatcagattctagtgggggcaagaca
ccaattgtttcttctgctgatgaagatggctgggaaactgttggaccaaagaacaaatct
gcagtcactagaactcagagttttgttccttcacggctaactacaatttttgggggtcag
ttaaggagccttgtgaagacgacaggcaacaaggcttcggcaacaattcagccattcctt
ttgctccatcttgacattttcccggatcatgttcacagcattgaggatgcactacgctta
ttttctgcacctgaaactattgaaggatataaagcatcacatggcaaggctggggtggta
aatgccagtaaatcagtgaaaatacaaacgctttccaagatattgatactgcatttaaca
agattcagctacggaagcaaaggaagcacaaaattgaacaagcctgtccatttcccatta
gagcttgatattggccgcgaactacttgtttccctgtcagagcgaagaagatacgagctt
gtggcaaccataacgcaccatgggcgagaaccaacaaagggccactacactgccgatgca
aggcatggctgtgtatggcttcggcatgatgatgcatctgttacggctgttaatacaaaa
aatgtcttgcacgaccaggcttatgttcttttctataagcaaatgtag
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