KEGG   Zingiber officinale (ginger): 122024506
Entry
122024506         CDS       T08725                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA2A-like
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122024506
Enzymes [BR:zof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122024506
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122024506
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-RING_16 Prok-RING_4 zf-C3HC4_3 zf-RING_4 Prok-RING_1 RINGv zf_RING_Vps8 zf_RING_Vps8_fungal zf-C3HC4_4 zf-RING-like FANCL_C zf-RING_Vps41
Other DBs
NCBI-GeneID: 122024506
NCBI-ProteinID: XP_042439083
LinkDB
Position
9B:complement(86730785..86731465)
AA seq 159 aa
MGLSNRLHDVPGDSLPLLLLAAAASSIAYLRALLLRILPLSSSADPDDSADCDGSLGSGL
AGLALLADHLAADRTFPFLLPRGDDLRPDCSVCLCRLADGDRVRRIPCGHVFHRDCLDRW
LLQLNLSCPLCRYRLVAPELRAAADRRIGAELVACLSQS
NT seq 480 nt   +upstreamnt  +downstreamnt
atgggtctctcgaaccgtctccacgacgtccccggcgactccctccctctcctcctcctg
gccgcggcagcgtcctccatcgcctacctccgcgcgctcctcctccgcatcctccccctc
tcctcctccgctgacccagacgactccgccgactgtgacggctccctcggatccggccta
gcgggcctcgccctccttgccgaccacctcgccgccgatcgaaccttccctttcctcctc
ccccgaggcgatgacctccgcccggattgctccgtctgtctctgccgcctcgccgacggc
gaccgcgtccgccgcatcccctgcggccatgtcttccaccgagactgcctcgacagatgg
ctgctccagctcaacctctcctgccctctctgccgctaccgtctcgtcgcgccggagctc
cgcgctgccgcagatcgtcggatcggagctgagctcgtcgcctgcctctcccaatcttga

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