Zingiber officinale (ginger): 122024771
Help
Entry
122024771 CDS
T08725
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122024771
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
122024771
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122024771
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122024771
2.5.1.29 geranylgeranyl diphosphate synthase
122024771
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122024771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
122024771
NCBI-ProteinID:
XP_042439398
LinkDB
All DBs
Position
9B:119283851..119285232
Genome browser
AA seq
368 aa
AA seq
DB search
MLQLIHCDKPPRLLIARAHYAMAYATVVCSYATNMTAKPPAGTVPAGAASRRQAAAVRCV
STPPELGSPVVERFDLKEYMAEKGRRVNEALELAVPLRYPELIHRSMRHSLLGGGKRVRP
LLAIAACELVGGCEAAAMPVACAAEMLHTMSLIHDDLPCMDNDALRRGQPTNHVLFGEET
AILAAIALHSFAFEHVAASASRVGVAPERVVRAILELSNSVGSEGLVAGQIVDISCEGKE
VDMGVLEYIHIHKTARLLEAAAVSGAIVGGGEEAEVERVRRYARSVGLLFQVVDDILDVT
KTSEELGKTAGKDLASDKTTYPKLLGLDGAREFAHTLVLQAEGELAAFDAARAAPLYHLA
RFIAYRHN
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaattgatccattgcgacaaacctcctcgccttctcatagcaagagcacactac
gccatggcctacgccaccgtcgtttgctcctacgccaccaacatgaccgcaaaaccgccc
gccgggactgtacccgccggcgctgcttcccgccgccaggcagctgcggtgcgctgcgtc
tcgacgccgccggaactcgggagcccggtggtggagcggttcgacctcaaggagtacatg
gcggagaagggccgcagggtgaacgaggcgctggagctggccgtgcccctccgctacccg
gagctcatccaccgatccatgcgccactccctcctcgggggcggcaagcgggtccggccg
ctcctcgccatcgccgcctgcgagctcgtcggcggatgcgaggcggccgccatgcccgtc
gcctgcgccgccgagatgctccacaccatgtcgctgatccacgacgacctcccctgcatg
gacaacgacgccctgcgccgcggccagccgaccaaccacgtcctcttcggcgaggaaacg
gccatactcgccgccatcgccctccactctttcgccttcgagcacgtcgccgccagcgcc
tcccgggtcggggtggcgccggagcgcgtcgtccgcgccatactggagctcagcaactcc
gtcggatccgagggcctagtggctggccagattgtggacatttcttgcgaggggaaggaa
gtggacatgggcgtgctggagtacatccacatccacaagactgcgcggctgctggaggcg
gcggcggttagcggggcgatcgtgggcggcggggaggaggcggaggtggagcgggtgcgc
cgctacgcgcgcagcgtggggctgctgttccaggtggtggacgacatcctggacgtgacg
aagacgtcggaagagttggggaagacggcggggaaggacctggccagcgacaagaccacc
tacccgaagctgctcggtctggacggcgcccgggaattcgctcacacgctggtgctccag
gccgagggggagctcgccgccttcgacgccgcccgggccgcgcccctctaccacctcgcc
cgcttcatagcttaccgccacaactag
DBGET
integrated database retrieval system
