Zingiber officinale (ginger): 122024843
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Entry
122024843 CDS
T08725
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6-like
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122024843
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122024843
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122024843
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C85
122024843
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
122024843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
122024843
NCBI-ProteinID:
XP_042439498
LinkDB
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Position
9B:106585824..106593785
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AA seq
529 aa
AA seq
DB search
MTRIFVQRGSSSSNSNRSQSNSGSHSSQDSSSSREDSEKQIVEDRNPIEDSGDRLENVED
KILNSDGSSQGINVEGGTNICAEEVKFSTNDVLDSAVCKGETSEHHLGQEAAVRSSIATL
VIGSSQIATSASYPPPPPAPPLNPFSTNQSSRRMGLGLSNSVRIGSSRRQSAWPVVGTRS
PSNSHPSSPRLYGEGDGYNSADEQGPGYVASYGDPERERLFEFEIRRTKGFEVKKMLEDG
NCLFRAVADQVYGDVEAYDMTRQMCVDYMEKERDHFSQFVIEGFTSYCKRKRRDKVHGNN
IEIQAFAEMYNRPIHIYSYSPEPINIFQGSYVTDVPPIRLSYHHGNHYNSLVDPRRTTVG
AGLGFSSLRGRNINTDQVKAAIKAQQDQQIDNALVAEGRFYSDLELTEKEIERMVMEASR
AEYLAKKVKQYPSFIESSTSRAEPSSSVAKTGSSQSLLEGEDEVLLPEMMLTSSMQAVLS
MGFGYMQAREAYSIFGDDVDSMICYLLEMGNSGTSLAEGKNGHKGKAAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactagaatctttgttcagcgtggttcttcttcctcaaattctaatcgatctcaatca
aattcgggatcgcactcttcccaggattcctctagttctagggaggactcagaaaaacag
attgttgaagatcggaatccaatagaagattctggagatcgcttagagaatgtcgaggat
aaaatcttgaactctgatggatcttctcaaggaattaatgttgagggtgggactaatata
tgtgctgaagaagtcaagttttcaactaatgatgtcctggattctgctgtttgtaaggga
gaaactagtgagcatcatttgggccaagaagctgctgttcgatccagcatagctacatta
gtaattggttcatctcagattgctacaagtgcttcctaccctccaccgcctccagcccca
ccattgaatcctttttcaactaatcagagttctaggagaatgggattaggattgtcaaac
tctgtgaggattggttcttcaagaaggcaatcagcttggccagttgttggaacacgttca
ccttcaaactctcatccttcttcccccaggttatatggtgaaggggacggttacaacagt
gctgatgagcaaggccctggctatgtggcctcatatggtgatccggagagagaaagactg
tttgaatttgagatacgacggacaaaaggttttgaagtgaaaaagatgttggaggatgga
aattgcctttttcgagctgttgcggaccaagtttatggtgatgtagaagcatatgatatg
acacggcaaatgtgtgttgattacatggaaaaggaacgggatcatttttctcagtttgta
attgaaggcttcacatcatactgcaaaagaaaaagaagagacaaggtccatggaaacaac
attgagatccaggcatttgcagaaatgtacaaccgccctatacatatctactcctatagc
cctgaacctattaacatctttcaagggagttatgtcactgatgttcctcctattcggtta
agttatcatcatggcaaccattacaactcacttgttgatccacgtaggacgacagtgggt
gcaggtcttggattcagtagtcttcgaggaagaaacataaacacggatcaggtgaaggct
gccattaaagcacagcaagaccagcaaattgataatgcacttgtggctgaggggcgcttc
tactctgatctggaactaaccgagaaggaaattgagaggatggtgatggaggcttcacga
gctgagtatttggctaagaaggtgaagcagtatccatcctttatcgagtcatcgacatcc
agggcagaaccatcatcttctgtggctaaaacagggtcgtcacaatctttattagagggc
gaggatgaggtcttgttgccagagatgatgctgaccagcagcatgcaggcggttctgtcc
atgggcttcggctacatgcaggcaagggaagcctatagcatctttggcgacgatgtggat
tcaatgatctgctacctgctggagatgggcaacagtggcacttcactggccgaggggaag
aatggacacaaggggaaagcagcggagtga
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