Zingiber officinale (ginger): 122024911
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Entry
122024911 CDS
T08725
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122024911
03041 Spliceosome [BR:
zof03041
]
122024911
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122024911
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122024911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
122024911
NCBI-ProteinID:
XP_042439581
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All DBs
Position
9B:complement(90334551..90350964)
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AA seq
430 aa
AA seq
DB search
MQQQQQQLILKQQQTLMQQALLLQQQQQQPQQQSLYPLPGLLAGPQIEPILSGNLPPRFD
PSTCRSVYVGNIHLQVTEALLQEVFQSTGIVEGCKLIRKEKLSFGFVDYFDRRSAALAIM
SLNGRQLFGQSIKVNWAYASGQREDTSGQYNIFVGDLSSEITDASLFACFSVYPSCSDAR
VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRPIRCNWATKGANANEEKQSSD
SKSVVELTNGSTAENVQENAHDDSPENIPHYTTVYVGNLAHEVTQVDLHRYFHALGAGAI
EDVRIQREKGFGFVRYSNHSEAALAIQMANGQVLCGKPIKCSWGSKPTPPGTASIPLPPP
AAAPFPGLSATDLFGYDRTLALSKMSANQALMQGHLAMKQAAMGIGTGASEAIYDGGFQN
AGAAQQLMYY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaacagcagcagctgatcctcaagcaacagcagactttgatgcagcaagcg
ctcctcctccagcagcagcaacagcagccgcagcagcagtcgctctatcctctcccgggt
ctcttggccggtcctcagatagagcctatcctaagtggaaatctacctcctagatttgat
ccaagcacatgccgcagtgtctatgtgggcaacattcatctccaggttactgaagcactt
cttcaagaagtttttcaaagtactggtattgttgagggatgcaagcttattaggaaagag
aagttatcctttggctttgttgattattttgatcgtcgttcagctgcccttgcaattatg
agtctcaatgggaggcagctgtttggtcaatctattaaggtgaactgggcatatgctagt
gggcaaagagaggatacatcaggacagtacaacatatttgttggtgaccttagctctgag
attacagatgcttctctgtttgcatgcttctctgtatacccaagctgctcagatgctagg
gtcatgtgggatcagaaaactggtcgttctagagggtttggttttgtttctttccggaac
caacaggatgctcaaagtgccataaatgacttgactggcaaatggctcggcagtcggcca
attcgttgtaactgggctacaaagggagctaatgctaatgaagagaaacaaagctcagat
tcaaagagtgtcgttgaactaacaaatggatctactgcggaaaacgtacaagaaaatgca
catgatgatagcccagagaatatcccacactatacaactgtatatgtgggtaatcttgct
catgaggttacacaagttgatctccaccgctatttccatgctttaggtgctggagcaatt
gaagatgtccgaattcaacgtgaaaaagggtttggatttgtgagatacagtaatcattct
gaagctgctttggctatccaaatggccaatggccaagttctatgcggaaagccaattaag
tgttcttggggtagcaaaccaactccacctggaacagcctccatcccgctccctccacct
gcagctgctcctttccctggactttctgcaactgacctctttggttatgatcgcaccctt
gctctgagcaagatgagtgcaaaccaggcactgatgcaaggccaccttgctatgaagcaa
gctgccatgggaattggcacaggcgcgagcgaagcaatctatgatggtgggttccaaaat
gctggtgcagcccagcagctgatgtactattag
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