Zingiber officinale (ginger): 122024916
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Entry
122024916 CDS
T08725
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic-like
KO
K02357
elongation factor Ts
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122024916
03029 Mitochondrial biogenesis [BR:
zof03029
]
122024916
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
122024916
Prokaryotic type
122024916
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
122024916
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
OB_PDCD11
DPM3
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
122024916
NCBI-ProteinID:
XP_042439585
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All DBs
Position
9B:complement(42230191..42237148)
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AA seq
1154 aa
AA seq
DB search
MTPVIHCSVGNITLVPRTVLPPRKEVKLTRCDTSGKDTKLKSYRRFLLSHSSVRLFQLYR
SSGIQTMAAVGTDLTVEETNPTVSAEVVDETLEVPPSSDESSVPSPSKSTTISNQTKRIR
PGRKSEMPPVNEEELVPGASFIGKIRSIQPFGCFVDFGAYTDGLVHVSRISDSYVKDVAS
VVSIGQEVKVRIVEANKETGRISLTMRDKDGTTKVQQKRESTAESGEKPKSFRKTGSRSD
QKRGETKKSSKFAKGQILDGTVKNLIRSGAFISLPDGEEGFLPIEEESDSFVILGSSSLQ
VGQEVNVRVLRIARGKVTLTMKKEEDVDELNKQLNQGVVHTATNPFELAFRKNKEISAFL
DERKRTQESLKKIEQTIEVGETVDNSDAFAVDNSAKANGDQTVGSSDSHTEVNDEISINE
EQLEEIPIVDSLSDVVESKDEGSLSALTETVDTVGKEDEKGSELLSHSSQDSVIDEIPVK
GIEDSTEILKEESITSQDSVPDGGESFASNLSFSLAVDDTLPSESKEAADDIRALEQPEG
TLLAAEEAEASSTQVTETGRAAETDEASLPSDDKEAAGDIKSEVSVEQVTETETFVKEEQ
GSEVPSLKEKEGNLNSTQVDDSAGNVKSEASLEQVTETEMTETPAKDEQGSETDDSTGQL
NTKKYYRTIPEDLSKNQFDKPIAIEDVAVPTNSSDAKSEAEGSLNEQTDSSDEPRSVKAT
ISPALVKQLREETGAGMMDCKKALVESGGDIAKAQELLRKKGLASADKKASRTTAEGRIG
SYIHDSRIGILIEVNCETDFVSRGEIFKELVEDLAMQVAACSQVCYLATEDIPEDIVNKE
REIEMQKEDLLSKPENIRSKIVDGRIRKRLEEFVLLEQPYIKNDKMVVKDLVKQTIATIG
ENIKVKRFVRLNLGEGLEKKSQNFAAEIAAQTTAKSSPAVAKDQSTETKDVEKSKTVAVS
ASLVKQLREETGAGMMDCKKALAETEGDIEKAQEYLRKKGLASADKKSSRLAAEGRISAY
IHDARIGTLIEVNCETDFVSRNEKFKELVDDLAMQVVACPQVEFVSIDEIPESIIAKEKE
IEMARDDLKSKPDQIKEKIVEGRITKRLGELALLEQPFIKDDDIKVKDLVKQTVAALGEN
IKVRRFVRFTLGEN
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtaattcattgttctgttggaaatatcactttggtccctagaactgtttta
ccaccaaggaaagaggtgaagttaacaagatgtgacacatctggaaaggatactaagctc
aaatcatatcgaagatttctgttatcacattcatcagtaagactgtttcagttgtataga
agctcaggaatccaaaccatggcagctgttggcactgatctaactgtagaagaaacaaat
ccaactgtttcagcggaagttgttgatgaaaccttggaagtaccacctagctctgatgaa
tcaagtgtaccttctccatcaaagtcaaccacaatttcaaatcaaaccaaacgcattagg
cctgggaggaaaagtgagatgcctcctgtgaacgaagaggaattagttccaggtgcttca
tttataggaaaaataaggtcaattcaaccatttggttgttttgtcgattttggagcctac
acagatggtttggtacatgtttccaggataagtgactcttatgtcaaagatgttgcatct
gtcgtctctattggacaagaggtgaaagtgagaattgttgaggccaataaggaaacagga
cggatatctctcacaatgcgtgacaaggatggcacaactaaggttcagcagaaaagggaa
tctacagctgaaagtggtgaaaagccaaaatctttcagaaaaactggttcaaggtcagac
caaaagcgaggggaaaccaaaaaaagctctaagtttgcaaagggtcagattttggatggt
actgtgaagaacctcataagatctggagcttttatatcacttccggatggagaagaagga
tttcttccaattgaagaagaatctgatagctttgttattttagggagttcatcactgcag
gttggccaagaagttaatgtacgagtattacgcattgccagaggaaaggtaactttaaca
atgaaaaaagaagaagatgttgatgaactaaataagcaactaaatcaaggtgtggtacac
acagcaacgaacccattcgagctggcattccgcaagaacaaggaaatttctgctttcttg
gatgagcgaaagaggacacaggagtctcttaaaaagattgaacaaacaattgaagttggt
gaaacagtggataattctgatgcttttgcagttgataattctgcaaaggctaatggggat
cagacagttggttcttctgattcacatactgaggttaatgatgagatatctattaatgaa
gagcagctggaggaaattcccattgtagattccctttcagatgttgtggaaagcaaggat
gagggatctctgagtgcattaactgagactgttgatacagttggaaaagaggatgaaaaa
ggatctgaactcttgagccactcttctcaggattcagttatagatgagattcctgtaaag
ggtattgaagattctacagagattctgaaggaagaaagcataacatcacaagattcagtt
ccggatggaggtgaatcttttgccagcaatttgtcttttagtctggcagtggatgataca
ctgccttctgaaagtaaagaagcagccgatgatatcagagctttggagcaacctgaaggg
actttgttggctgctgaagaagctgaggcctcttcaactcaagtgacagaaactggaaga
gcagctgaaacagatgaagcctcattgccttccgacgataaagaagctgctggtgatatc
aaatctgaggtttctgtagaacaagtgacagaaactgaaacatttgtgaaagaagaacaa
ggttctgaagttccatcattaaaagaaaaagagggcaatctaaattctacacaagttgac
gattctgctggtaatgtcaaatctgaggcttctttagaacaagtgacagaaactgaaatg
actgaaacacctgcgaaagatgaacaaggttctgaaactgatgattctactgggcaatta
aataccaaaaagtattacaggactatcccagaggacctttctaaaaaccaatttgataaa
cccatagctattgaagatgtggctgttcccactaactcaagcgatgccaaatcagaggct
gaaggaagcttgaatgagcaaactgactcttctgatgaaccaagatctgtcaaagctact
atttccccagctctggtgaagcaattacgcgaagaaacaggtgcaggtatgatggactgc
aagaaggctcttgtagaatctgggggtgacattgctaaggcccaagagttgctccgaaag
aaaggtttagcaagcgcggataaaaaggccagtagaacaactgccgaaggaaggattggg
tcctacatccatgacagcagaataggcatcctcatagaggtgaactgtgaaacggatttc
gtgtctcgaggtgaaatctttaaggagttggttgaagaccttgctatgcaagtagcagca
tgttctcaggtttgttatttagcaactgaagatatcccagaagatattgtgaacaaggaa
agggaaattgaaatgcagaaggaagaccttttgtcaaaacctgagaacataagatcaaaa
attgttgatggccgaatcaggaagaggcttgaggaatttgtgttgctggagcaaccttac
ataaaaaatgacaagatggtagttaaggatttagttaagcagaccattgctacaattgga
gagaatattaaggtaaaaaggtttgttcgtctcaatcttggagaaggcttggagaagaaa
agccaaaactttgcagccgaaatcgccgcacagactacagctaaatcttcacctgcggtt
gcaaaagatcaatctaccgaaacaaaagatgttgagaagtcaaaaacagttgcagtatca
gcttcattagtgaagcaacttcgagaggaaacaggtgctggcatgatggactgcaagaaa
gctcttgcagagactgaaggagacattgaaaaggctcaggaatacctccgcaagaaggga
ctggcatcggctgataaaaaatcctccagacttgccgcagaaggtcggatttcagcctat
attcatgatgcgcggatcggcacacttattgaagttaactgcgaaacagactttgtgagc
cggaatgagaagttcaaggaattggtggatgatcttgctatgcaagtggtggcctgccct
caggttgagtttgtttcgatagatgaaatcccagagagtatcattgcgaaggaaaaagaa
atagaaatggcaagagatgatctgaagtcaaagccggaccaaataaaggagaagatagtg
gaagggaggatcacaaagaggctaggagaacttgctctcttggaacagcccttcatcaaa
gatgatgatattaaggtgaaggatctggtgaaacagacagtggctgcgctaggagagaac
atcaaagttagaaggtttgttcgcttcactctcggagagaactga
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