KEGG   Zingiber officinale (ginger): 122025016
Entry
122025016         CDS       T08725                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122025016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122025016
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122025016
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     122025016
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 122025016
NCBI-ProteinID: XP_042439707
LinkDB
Position
9B:116805697..116812352
AA seq 128 aa
MSFAGPEDILLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL
FCDIPLGLYVIRGENVVLIGELDSEREELPAHMICVSVPEIKRAQKAEREATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttttgcgggaccagaagacatcttgctctccacttcccttgctagctatctggac
aaaaagcttcttgtgttattacgcgatgggcgaaagcttctaggcattcttcgttctttt
gaccaatttgccaatgtggttcttgaaggtgcatgcgagcgggtaattgtaggagattta
ttctgtgatattcctctgggtctctacgtgatccgtggggagaatgtcgttttaatagga
gaactggactcggagagggaggagcttccagcccatatgatctgtgtttcggttccagag
atcaaaagggcacaaaaagctgagagggaagccacagatctcaagggctctatgaggaag
agaatggagtttctcgatctcgactag

DBGET integrated database retrieval system