Zingiber officinale (ginger): 122025023
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Entry
122025023 CDS
T08725
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122025023
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122025023
Peptidases and inhibitors [BR:
zof01002
]
Serine peptidases
Family S54: Rhomboid family
122025023
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Motif
Other DBs
NCBI-GeneID:
122025023
NCBI-ProteinID:
XP_042439713
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All DBs
Position
9B:97618932..97624083
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AA seq
386 aa
AA seq
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MAPEAEAKLRSWRGSDGSDGHHSVDVGPAVAPPPAPAPAQIPGPPQRQRDKKWWPLLVPV
IFVANVIMFVITMYVNNCPRNSPLSSCVLRRLGRFSFQPLRQNPLLGPSTQTLQKMGALV
VDKVVHGHQGWRLITCIWLHAGVVHLLANMLGLLLIGIRLEQEFGFVRIGPLYVISGIGG
SVLSALFVQSNISVGASGALLGLLGAMLSELITNWTIYANKCSAMTALIVIVAINLALGI
LPHVDNFAHIGGFVTGFLLGFVLLIRPQYGYLSQKYTPVGYNGPVKNKHMIYQYVLWVIG
AILLIVGFTVGLILLFRGFNGNDHCSWCHYLSCVPTSRWNCRQGTETCEVSQLGSSMYNI
TCQGSGRNRVYNTTQSTTDLCNQLCS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgaggccgaggcgaagttgcggtcgtggagggggagcgacggctccgacggc
caccactctgtcgatgtcggccccgcggtcgcccctccgccggcgcctgcgccggcgcag
atcccgggcccgccccagcggcagcgggacaagaagtggtggccgttgctggtgcccgtc
atcttcgtggccaacgtgatcatgttcgtcatcaccatgtacgtcaacaattgccccagg
aacagcccccttagctcctgcgtcctgcgccgcctcggccggttctcattccagcccctc
aggcagaacccgctcctcggaccttccactcaaacgctccagaagatgggtgctctagta
gttgataaagtcgttcatggacatcaaggatggcgactcattacttgtatttggctacat
gctggggttgtccatctacttgccaatatgttgggccttctattgattggaattagactc
gaacaagaatttggatttgtgagaattggaccactctatgtcatttctggaattggtggg
agtgttttatctgctctatttgtccaatcaaatatctctgttggtgcttctggtgctctt
ttagggttgcttggagcgatgctttcagaactcataacaaattggacaatatatgcaaat
aagtgttcagcaatgacagcgcttattgtgatagtagcaattaacttggctcttggaatc
ctcccccatgttgacaactttgctcacattggaggatttgttactggattccttctagga
tttgtccttctaatccgtccacaatatggttatctaagtcagaagtacactcctgttgga
tacaatggccctgtaaagaacaagcatatgatctatcaatatgtgttatgggttattggt
gccatcttgctaattgttgggttcactgtaggcctgatattgttgttcagaggattcaat
gggaatgatcactgctcctggtgccattatttaagctgcgtccctacctccaggtggaac
tgcagacagggaactgaaacatgcgaggtttcacagcttgggagcagcatgtacaacatt
acttgccagggtagtgggagaaaccgtgtgtacaatacaacccaatcgactactgacttg
tgtaaccaactctgcagttga
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